RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 OSGIN2Q9Y236 505 aa10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 V9GYY5 206 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-216ENST00000560243 EML6Q6ZMW3 1958 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 G3V2L1 256 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 MANBAO00462 879 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 PGRMC2O15173 223 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 ITGA10O75578 1167 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC25A12O75746 678 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 ZFAND5O76080 213 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 SEMA3DO95025 777 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 PROCP04070 461 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 KLK1P06870 262 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 SP1P08047 785 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 GSTA1P08263 222 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 NR2F6P10588 404 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 CD46P15529 392 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 CHN1P15882 459 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 TRHRP34981 398 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 STT3AP46977 705 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 HLCSP50747 726 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 ARFIP1P53367 373 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 SERTAD2Q14140 314 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 ELOAQ14241 798 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 MAPKAPK3Q16644 382 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 MYO7BQ6PIF6 2116 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 GPRIN3Q6ZVF9 776 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 NUDT13Q86X67 352 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 TDRPQ86YL5 185 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 MMP21Q8N119 569 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 MORN4Q8NDC4 146 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 OR14A16Q8NHC5 309 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC2A12Q8TD20 617 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 SELENOMQ8WWX9 145 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 DAZLQ92904 295 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 L3HYPDHQ96EM0 354 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 C5orf34Q96MH7 638 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 TSPAN10Q9H1Z9 355 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 TRIM45Q9H8W5 580 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 LYARQ9NX58 379 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 MS4A12Q9NXJ0 267 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 TRPS1Q9UHF7 1281 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 DCDC2Q9UHG0 476 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC12A4Q9UP95 1085 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
RABGGTA-216ENST00000560243 WWP2O00308 870 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 FCHO1O14526 889 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 UBFD1O14562 309 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNF500O60304 480 aaPredicted RBP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 NME2P1O60361 137 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNF354AO60765 605 aaPredicted RBP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 GLRA3O75311 464 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 OR2J2O76002 312 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 UNC5CO95185 931 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 GPR75O95800 540 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 KRT15P19012 456 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 NME2P22392 152 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 TLX1P31314 330 aaPredicted RBP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 CYB561P49447 251 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 HTR6P50406 440 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 GALNT1Q10472 559 aaPredicted RBP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 TBL3Q12788 808 aaKnown RBP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 HIST2H2BCQ6DN03 193 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 SLC25A25Q6KCM7 469 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 ZYG11AQ6WRX3 759 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 HSDL2Q6YN16 418 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 COMMD6Q7Z4G1 85 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 MDGA2Q7Z553 956 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 C4orf33Q8N1A6 199 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 METTL4Q8N3J2 472 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 CCNYL1Q8N7R7 359 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNF721Q8TF20 911 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 SSC4DQ8WTU2 575 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 TANKQ92844 425 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 SENP5Q96HI0 755 aaPredicted RBP10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 FRMD6Q96NE9 622 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 DGAT2Q96PD7 388 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 KCNA7Q96RP8 456 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNF382Q96SR6 550 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 GSTO2Q9H4Y5 243 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 MYOTQ9UBF9 498 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 SNX6Q9UNH7 406 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 PCDHGB6Q9Y5F9 930 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 UNC79Q9P2D8 2635 aa10.82□□□□□ -0.68
RABGGTA-216ENST00000560243 CROCCQ5TZA2 2017 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 TLDC2A0PJX2 215 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 ASPDHA6ND91 283 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 ZNHIT1O43257 154 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 PLIN3O60664 434 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 OR6B1O95007 311 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 LDLRP01130 860 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 CRYABP02511 175 aaKnown RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 IGKV3-11P04433 115 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 MYL2P10916 166 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 ALOX15P16050 662 aaPredicted RBP10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 KRT4P19013 534 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 CRHR1P34998 444 aa10.81□□□□□ -0.68
RABGGTA-216ENST00000560243 RFC3P40938 356 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms