RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SNX6Q9UNH7 406 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 STK38LQ9Y2H1 464 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 CLCA3PQ9Y6N3 262 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
SMAD3-213ENST00000560175 EML6Q6ZMW3 1958 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 CROCCQ5TZA2 2017 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 ANKUB1A6NFN9 424 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 WASHC1A8K0Z3 465 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 ESPNB1AK53 854 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 MANBAO00462 879 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 ZFAND5O76080 213 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 RASAL1O95294 804 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 ESRRBO95718 433 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SP1P08047 785 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 BUD31P41223 144 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SLCO1A2P46721 670 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 PKNOX1P55347 436 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 FOLH1Q04609 750 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 LCP2Q13094 533 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SPRED3Q2MJR0 410 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SLC25A25Q6KCM7 469 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 CYP20A1Q6UW02 462 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 FAM180AQ6UWF9 173 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 ST13P4Q8IZP2 240 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-213ENST00000560175 MREGQ8N565 214 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SLC2A12Q8TD20 617 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 CHTF18Q8WVB6 975 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SELENOMQ8WWX9 145 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 PSMG3-AS1Q96PY0 264 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
SMAD3-213ENST00000560175 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
SMAD3-213ENST00000560175 OXSMQ9NWU1 459 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SIRT5Q9NXA8 310 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 LRFN1Q9P244 771 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 MYOTQ9UBF9 498 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 LGALS13Q9UHV8 139 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 CES1P1Q9UKY3 287 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 YARS2Q9Y2Z4 477 aaKnown RBP12.29□□□□□ -0.44
SMAD3-213ENST00000560175 GTF3C1Q12789 2109 aa12.29□□□□□ -0.44
SMAD3-213ENST00000560175 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
SMAD3-213ENST00000560175 DOPEY1Q5JWR5 2465 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 C17orf105B2RV13 164 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 H3BQF6 201 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 FCHO1O14526 889 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 UBFD1O14562 309 aaKnown RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 PGRMC2O15173 223 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 SEMA7AO75326 666 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 AIFM1O95831 613 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 CRYABP02511 175 aaKnown RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 KRT6AP02538 564 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 KRT6BP04259 564 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 IFNA16P05015 189 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 UQCRHP07919 91 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 CD46P15529 392 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 KRT15P19012 456 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 KRT4P19013 534 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 KRT6CP48668 564 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 CYB561P49447 251 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 CSTF3Q12996 717 aaKnown RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 FHL5Q5TD97 284 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 TTC19Q6DKK2 380 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 HSDL2Q6YN16 418 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 DGAT2L6Q6ZPD8 337 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 GPRIN3Q6ZVF9 776 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 PAGE2Q7Z2X7 111 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 TRABD2AQ86V40 505 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 OR4N5Q8IXE1 308 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 ZNF321PQ8N8H1 164 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 CDYL2Q8N8U2 506 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 GBP7Q8N8V2 638 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 OR2W6PQ8NHA6 318 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 AGAP11Q8TF27 550 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 UCN3Q969E3 161 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 TM4SF18Q96CE8 201 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 RBM18Q96H35 190 aaKnown RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 SENP5Q96HI0 755 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 PELOQ9BRX2 385 aaKnown RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 OLAHQ9NV23 265 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 NMRK1Q9NWW6 199 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 TEX10Q9NXF1 929 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 VPS29Q9UBQ0 182 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 RAB21Q9UL25 225 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 ICE1Q9Y2F5 2266 aa12.28□□□□□ -0.44
SMAD3-213ENST00000560175 SPTBN1Q01082 2364 aaKnown RBP12.28□□□□□ -0.44
SMAD3-213ENST00000560175 NBPF19A0A087WUL8 3843 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 MYOCOSA0A1B0GUC4 107 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 NME2P1O60361 137 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 ULK1O75385 1050 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 PRKRAO75569 313 aaKnown RBP12.27□□□□□ -0.45
SMAD3-213ENST00000560175 ITGA10O75578 1167 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 GBAP04062 536 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 KLK1P06870 262 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 STSP08842 583 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 SLC35E2P0CK97 266 aa12.27□□□□□ -0.45
SMAD3-213ENST00000560175 NR2F6P10588 404 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms