RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ZNF786Q8N393 782 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 ZDHHC1Q8WTX9 485 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 LCN9Q8WX39 176 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 NEUROD4Q9HD90 331 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 DNAAF2Q9NVR5 837 aaKnown RBP16.87■□□□□ 0.29
SNX1-208ENST00000559844 ORC6Q9Y5N6 252 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 FAM186AA6NE01 2351 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 A0A0A6YYD5 115 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 MYOCOSA0A1B0GUC4 107 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 A6NCN8 305 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 ISM1B1AKI9 464 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 DPM1O60762 260 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 ETFAP13804 333 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 DRD2P14416 443 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 SSR2P43308 183 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 ALDH9A1P49189 494 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 IST1P53990 364 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 TMEM26Q6ZUK4 368 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 PLD3Q8IV08 490 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 ZNF555Q8NEP9 628 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 PATE1Q8WXA2 126 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 SLC22A18Q96BI1 424 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 DPH7Q9BTV6 452 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 FAIM2Q9BWQ8 316 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 GABARAPL1Q9H0R8 117 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 TMEM9BQ9NQ34 198 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 C1GALT1Q9NS00 363 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 GPATCH2Q9NW75 528 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 C3orf18Q9UK00 162 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 MAGED1Q9Y5V3 778 aaPredicted RBP16.86■□□□□ 0.29
SNX1-208ENST00000559844 TRBV23OR9-2A0A075B6M9 112 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 CHRM5P08912 532 aaPredicted RBP16.86■□□□□ 0.29
SNX1-208ENST00000559844 ZNF883P0CG24 379 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 GIMD1P0DJR0 217 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 NELFEP18615 380 aaKnown RBP16.86■□□□□ 0.29
SNX1-208ENST00000559844 PEBP1P30086 187 aaKnown RBP16.86■□□□□ 0.29
SNX1-208ENST00000559844 FRKP42685 505 aaPredicted RBP16.86■□□□□ 0.29
SNX1-208ENST00000559844 SCARB2Q14108 478 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 ADPRMQ3LIE5 342 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 COX20Q5RI15 118 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 CCDC80Q76M96 950 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 MMP21Q8N119 569 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 MFSD9Q8NBP5 474 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 SRFBP1Q8NEF9 429 aaKnown RBP16.86■□□□□ 0.29
SNX1-208ENST00000559844 OR10Q1Q8NGQ4 319 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 NRBF2Q96F24 287 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 DOHHQ9BU89 302 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 TRIM4Q9C037 500 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 SMURF2Q9HAU4 748 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 SPHK1Q9NYA1 384 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 NLGN3Q9NZ94 848 aa16.86■□□□□ 0.29
SNX1-208ENST00000559844 A0A087WXM4 84 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 PRAMEF33A0A0G2JMD5 474 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 HAT1O14929 419 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 TMPRSS11DO60235 418 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 GUCY1B2O75343 617 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 IFNA14P01570 189 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 DNAJA1P31689 397 aaKnown RBP16.85■□□□□ 0.29
SNX1-208ENST00000559844 RAD23AP54725 363 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 MANFP55145 182 aaKnown RBP16.85■□□□□ 0.29
SNX1-208ENST00000559844 SLC5A12Q1EHB4 618 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 ZIK1Q3SY52 487 aaPredicted RBP16.85■□□□□ 0.29
SNX1-208ENST00000559844 C6orf132Q5T0Z8 1188 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 ZNF425Q6IV72 752 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 RNF130Q86XS8 419 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 ARL10Q8N8L6 244 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 MAL2Q969L2 176 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 ZBED6CLQ96FA7 236 aaPredicted RBP16.85■□□□□ 0.29
SNX1-208ENST00000559844 TPD52L3Q96J77 140 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 TSC22D3Q99576 134 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 GRIP2Q9C0E4 1043 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 TOR3AQ9H497 397 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 EPS8L2Q9H6S3 715 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 ACSS1Q9NUB1 689 aaPredicted RBP16.85■□□□□ 0.29
SNX1-208ENST00000559844 TAS2R7Q9NYW3 318 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 EHD3Q9NZN3 535 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 ACSL6Q9UKU0 697 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 ABCG2Q9UNQ0 655 aa16.85■□□□□ 0.29
SNX1-208ENST00000559844 HS6ST1O60243 411 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 FOXD2O60548 495 aaPredicted RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 ALPPL2P10696 532 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 FPR1P21462 350 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 TSFMP43897 325 aaKnown RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 PLA2G16P53816 162 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 ITGA1P56199 1179 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 PCBP4P57723 403 aaKnown RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 SELENOWP63302 87 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 SUZ12Q15022 739 aaKnown RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 MLC1Q15049 377 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 NADK2Q4G0N4 442 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 VTCN1Q7Z7D3 282 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 GALNT10Q86SR1 603 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 EID2Q8N6I1 236 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 OR4E2Q8NGC2 313 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 OR4C6Q8NH72 309 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 OR5AK3PQ8NH89 298 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 LZICQ8WZA0 190 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 TEFMQ96QE5 360 aaKnown RBP16.84■□□□□ 0.29
SNX1-208ENST00000559844 C17orf62Q9BQA9 187 aa16.84■□□□□ 0.29
SNX1-208ENST00000559844 DUSP23Q9BVJ7 150 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms