RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZBTB8BQ8NAP8 495 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 FAM83FQ8NEG4 500 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 OR5D16Q8NGK9 328 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 OR5P2Q8WZ92 322 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 COX14Q96I36 57 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 INIPQ9NRY2 104 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 SACM1LQ9NTJ5 587 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 SPATA7Q9P0W8 599 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ICKQ9UPZ9 632 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 IFT52Q9Y366 437 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 PCDHGA3Q9Y5H0 932 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 HMGN4O00479 90 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ZW10O43264 779 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 TBX1O43435 398 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 OR1F1O43749 312 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ATP6V1G1O75348 118 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ENTPD6O75354 484 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MFN2O95140 757 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 RB1P06400 928 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 EPHX1P07099 455 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MAGP20916 626 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 CD72P21854 359 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 GTF2E2P29084 291 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 RGS6P49758 472 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 SEPHS1P49903 392 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 CDC42P60953 191 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 COL9A2Q14055 689 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 SYPL1Q16563 259 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 FRMPD2BQ6IN97 320 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 PNCKQ6P2M8 343 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 PLEKHG7Q6ZR37 379 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 LINC00299Q6ZSB3 139 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 USP43Q70EL4 1123 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ADCK2Q7Z695 626 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 KIAA1958Q8N8K9 716 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 OR5K2Q8NHB8 316 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 SMG7Q92540 1137 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 KLK6Q92876 244 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 PPP1R16AQ96I34 528 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 RAD9AQ99638 391 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 AIF1LQ9BQI0 150 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MENTQ9BUN1 341 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 CDADC1Q9BWV3 514 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 RHBGQ9H310 441 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MBNL1Q9NR56 388 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 QPCTLQ9NXS2 382 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 AHSPQ9NZD4 102 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 DNAJC27Q9NZQ0 273 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 KCND3Q9UK17 655 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 HCN2Q9UL51 889 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 WDR37Q9Y2I8 494 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 OR1A2Q9Y585 309 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 GLOD5A6NK44 160 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 SCAMP1O15126 338 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CAPN5O15484 640 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 NDUFS4O43181 175 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 OR12D1P0DN82 309 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 ALPPL2P10696 532 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 ELAVL4P26378 380 aaKnown RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CLCNKAP51800 687 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 PPP5CP53041 499 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 PCBP4P57723 403 aaKnown RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CDK3Q00526 305 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 REEP5Q00765 189 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 TCTN3Q6NUS6 607 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 LRRTM4Q86VH4 590 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 LINC01555Q8NAE3 123 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 WDR36Q8NI36 951 aaKnown RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 BADQ92934 168 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 AICDAQ9GZX7 198 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 TMEM245Q9H330 911 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 A4GALTQ9NPC4 353 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 REV1Q9UBZ9 1251 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CAB39Q9Y376 341 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 ALPK3Q96L96 1907 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 COL4A3Q01955 1670 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 TBC1D3BA6NDS4 549 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 AGAP5A6NIR3 686 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 A8MVJ9 347 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 M0R3H8 397 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 TLR4O00206 839 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 SLC28A2O43868 658 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 OR10H3O60404 316 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 TPST2O60704 377 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 ERGP11308 486 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 IMPDH2P12268 514 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CKMT1AP12532 417 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CCR8P51685 355 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 LSM11P83369 360 aaKnown RBP eCLIP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 WSCD2Q2TBF2 565 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 TPRG1LQ5T0D9 272 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 PIP5KL1Q5T9C9 394 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 ADGRD2Q7Z7M1 963 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 IQCF1Q8N6M8 205 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 SP7Q8TDD2 431 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 SMPDL3AQ92484 453 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 SUSD6Q92537 303 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 HTRA1Q92743 480 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms