RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 PTGR2Q8N8N7 351 aaPredicted RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 PHF21BQ96EK2 531 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 SENP5Q96HI0 755 aaPredicted RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 PAFAH2Q99487 392 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 PELOQ9BRX2 385 aaKnown RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 SORBS1Q9BX66 1292 aaKnown RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 NOL11Q9H8H0 719 aaKnown RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 RYDENQ9NUL5 291 aaKnown RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.23
TPM1-218ENST00000559281 LYARQ9NX58 379 aaKnown RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 LRRC14BA6NHZ5 514 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 E9PLN8 166 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 STX16-NPEPL1H3BU86 382 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 KIF2AO00139 706 aaPredicted RBP16.47■□□□□ 0.23
TPM1-218ENST00000559281 ACOT7O00154 380 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 STX16O14662 325 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 PROM1O43490 865 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 HS6ST1O60243 411 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 CDC40O60508 579 aaKnown RBP eCLIP16.47■□□□□ 0.23
TPM1-218ENST00000559281 OR6B1O95007 311 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 SIX3O95343 332 aaPredicted RBP16.47■□□□□ 0.23
TPM1-218ENST00000559281 ETHE1O95571 254 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 RFC3P40938 356 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 SOX3P41225 446 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 CCNG1P51959 295 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 HSF1Q00613 529 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 TNFRSF17Q02223 184 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 PLGLB1Q02325 96 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 FOLH1Q04609 750 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 ZNF630Q2M218 657 aaPredicted RBP16.47■□□□□ 0.23
TPM1-218ENST00000559281 MPEG1Q2M385 716 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 RTL4Q6ZR62 310 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 DOLPP1Q86YN1 238 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 PLD6Q8N2A8 252 aaKnown RBP16.47■□□□□ 0.23
TPM1-218ENST00000559281 RNF175Q8N4F7 328 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 GOLM1Q8NBJ4 401 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 NOA1Q8NC60 698 aaKnown RBP16.47■□□□□ 0.23
TPM1-218ENST00000559281 ZNF721Q8TF20 911 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 AGAP11Q8TF27 550 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 ISL2Q96A47 359 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 SERPINI1Q99574 410 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 VKORC1Q9BQB6 163 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 DDX31Q9H8H2 851 aaKnown RBP16.47■□□□□ 0.23
TPM1-218ENST00000559281 AHSPQ9NZD4 102 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 ZNF180Q9UJW8 692 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 PPT2Q9UMR5 302 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 RNF11Q9Y3C5 154 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 ATG4BQ9Y4P1 393 aa16.47■□□□□ 0.23
TPM1-218ENST00000559281 A0A087WUV0 522 aaPredicted RBP16.46■□□□□ 0.23
TPM1-218ENST00000559281 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 POC1B-GALNT4F8VUJ3 575 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 OR10H2O60403 315 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 GPR75O95800 540 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 FAM58BPP0C7Q3 252 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 ALOX15P16050 662 aaPredicted RBP16.46■□□□□ 0.23
TPM1-218ENST00000559281 CNR1P21554 472 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 PTGER1P34995 402 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 MAGEA12P43365 314 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 ADORA2A-AS1P86434 159 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 C18orf63Q68DL7 685 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 TTC19Q6DKK2 380 aaPredicted RBP16.46■□□□□ 0.23
TPM1-218ENST00000559281 ARHGAP11AQ6P4F7 1023 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 GK5Q6ZS86 529 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 NUDT13Q86X67 352 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 TICAM1Q8IUC6 712 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 ST13P4Q8IZP2 240 aaPredicted RBP16.46■□□□□ 0.23
TPM1-218ENST00000559281 ZNF321PQ8N8H1 164 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 NUBPLQ8TB37 319 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 WDR20Q8TBZ3 569 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 PHF10Q8WUB8 498 aaKnown RBP16.46■□□□□ 0.23
TPM1-218ENST00000559281 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
TPM1-218ENST00000559281 MRPL57Q9BQC6 102 aaKnown RBP16.46■□□□□ 0.23
TPM1-218ENST00000559281 NTMT1Q9BV86 223 aa16.46■□□□□ 0.23
TPM1-218ENST00000559281 CROCCQ5TZA2 2017 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 A0A0A6YYD5 115 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 IQANK1A0A1B0GTG1 560 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 SEMA3DO95025 777 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 P04436 131 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 TPOP07202 933 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 SNRPAP09012 282 aaKnown RBP16.45■□□□□ 0.22
TPM1-218ENST00000559281 NR2F6P10588 404 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 BSGP35613 385 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 NEK2P51955 445 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 HNRNPH2P55795 449 aaKnown RBP16.45■□□□□ 0.22
TPM1-218ENST00000559281 PPIAP62937 165 aaKnown RBP16.45■□□□□ 0.22
TPM1-218ENST00000559281 TBL3Q12788 808 aaKnown RBP16.45■□□□□ 0.22
TPM1-218ENST00000559281 IFT88Q13099 833 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 ZNF750Q32MQ0 723 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 CMPK2Q5EBM0 449 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 PIGGQ5H8A4 983 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 NDUFAF5Q5TEU4 345 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 MRM1Q6IN84 353 aaKnown RBP16.45■□□□□ 0.22
TPM1-218ENST00000559281 SLC22A16Q86VW1 577 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 CHERPQ8IWX8 916 aaKnown RBP16.45■□□□□ 0.22
TPM1-218ENST00000559281 SLC15A4Q8N697 577 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 OR2M7Q8NG81 312 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 FAM57AQ8TBR7 257 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 SLC22A8Q8TCC7 542 aa16.45■□□□□ 0.22
TPM1-218ENST00000559281 SREK1Q8WXA9 508 aaKnown RBP16.45■□□□□ 0.22
TPM1-218ENST00000559281 FBXL20Q96IG2 436 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms