RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 UMODL1Q5DID0 1318 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 A0A0U1RQV5 110 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 hCG_38984A0A1B0GV85 526 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SH3PXD2BA1X283 911 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 NKX6-3A6NJ46 265 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SHISA7A6NL88 538 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SMIM1B2RUZ4 78 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PDXKO00764 312 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SH2D1BO14796 132 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 IKBKBO14920 756 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ANGPT2O15123 496 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SURF4O15260 269 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 MAGEC1O60732 1142 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 KRT33AO76009 404 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 MFN2O95140 757 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SEC24AO95486 1093 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ANP32DO95626 131 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PPP1R3DO95685 299 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CLPTM1O96005 669 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 UGT2B4P06133 528 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 GPIP06744 558 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 GSTT2P0CG29 244 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 GSTT2BP0CG30 244 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 FGF3P11487 239 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PLA2G2AP14555 144 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 RPA2P15927 270 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 C4BPBP20851 252 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 MARK3P27448 753 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ID1P41134 155 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SOX3P41225 446 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 TSFMP43897 325 aaKnown RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 NPY2RP49146 381 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CCR4P51679 360 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 GBX2P52951 348 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ARFIP1P53367 373 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PAX9P55771 341 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PEX3P56589 373 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 OR1D5P58170 312 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ACTR1AP61163 376 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 NOP14P78316 857 aaKnown RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PHEXP78562 749 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CDKL1Q00532 357 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SRYQ05066 204 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 MSLNQ13421 630 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SNTB2Q13425 540 aaKnown RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 DRP2Q13474 957 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 GCKRQ14397 625 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 P2RY14Q15391 338 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 OR1C1Q15619 314 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 TRIP10Q15642 601 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 KIAA1644Q3SXP7 199 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SLC36A3Q495N2 470 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 NADK2Q4G0N4 442 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 FAM106AQ4KMX7 169 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 TMEM41BQ5BJD5 291 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SPANXN4Q5MJ08 99 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 FFAR4Q5NUL3 377 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 TCHHL1Q5QJ38 904 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 DCAF12Q5T6F0 453 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 C1orf189Q5VU69 101 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PLPP4Q5VZY2 271 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF324BQ6AW86 544 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SLC35E4Q6ICL7 350 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PMF1Q6P1K2 205 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 FAM159AQ6UWV7 190 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 LEKR1Q6ZMV7 388 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 Q6ZVQ6 151 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 P4HA3Q7Z4N8 544 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PTAR1Q7Z6K3 402 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 GPBP1Q86WP2 473 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 HOGA1Q86XE5 327 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CACUL1Q86Y37 369 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 LINC00518Q8N0U6 118 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CENPSQ8N2Z9 138 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 MARVELD2Q8N4S9 558 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 MINDY2Q8NBR6 621 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ADAD2Q8NCV1 583 aaKnown RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 OR2T11Q8NH01 316 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 LMO3Q8TAP4 145 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF606Q8WXB4 792 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SHC3Q92529 594 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CASP10Q92851 521 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 NCLNQ969V3 563 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ZNF486Q96H40 463 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 SENP5Q96HI0 755 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 C10orf90Q96M02 699 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 VPS35Q96QK1 796 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CRACR2AQ9BSW2 395 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 TDRD1Q9BXT4 1180 aaKnown RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 DGCR6LQ9BY27 220 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 NLNQ9BYT8 704 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 PUS3Q9BZE2 481 aaKnown RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 RAB33BQ9H082 229 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 FAM124BQ9H5Z6 455 aaPredicted RBP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ATP13A3Q9H7F0 1226 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 WDR76Q9H967 626 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 CD93Q9NPY3 652 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 ZFP57Q9NU63 452 aa2.03□□□□□ -2.08
GABPB1-209ENST00000559100 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.03□□□□□ -2.08
GABPB1-209ENST00000559100 RDH8Q9NYR8 311 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms