RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 FAR1Q8WVX9 515 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 SELENOMQ8WWX9 145 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 MTBPQ96DY7 904 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 SEC16BQ96JE7 1060 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 C5orf34Q96MH7 638 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 TMEM237Q96Q45 408 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 MRPL1Q9BYD6 325 aaKnown RBP11.2□□□□□ -0.62
TPM1-216ENST00000558910 SHCBP1LQ9BZQ2 653 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 CLK4Q9HAZ1 481 aaKnown RBP11.2□□□□□ -0.62
TPM1-216ENST00000558910 KCMF1Q9P0J7 381 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 LRFN1Q9P244 771 aa11.2□□□□□ -0.62
TPM1-216ENST00000558910 G3V3Y1 287 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 H0YIV9 168 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 STX16-NPEPL1H3BU86 382 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 STX16O14662 325 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 TMPRSS11DO60235 418 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 CTNSO60931 367 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 CBX6O95503 412 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 PDYNP01213 254 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 KLK1P06870 262 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 CYC1P08574 325 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 SERPINB1P30740 379 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 PTGER1P34995 402 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 PIK3CBP42338 1070 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 FOLH1Q04609 750 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 CLCQ05315 142 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 BTKQ06187 659 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 C4orf17Q53FE4 359 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 UNC50Q53HI1 259 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 FRG2Q64ET8 278 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 LETMD1Q6P1Q0 360 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 TIFABQ6ZNK6 161 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 DGAT2L6Q6ZPD8 337 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 GALNTL5Q7Z4T8 443 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
TPM1-216ENST00000558910 TMEM156Q8N614 296 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 L3MBTL4Q8NA19 623 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 WDR20Q8TBZ3 569 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 ADAMTS18Q8TE60 1221 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 ZNF483Q8TF39 744 aaPredicted RBP11.19□□□□□ -0.62
TPM1-216ENST00000558910 DGAT2Q96PD7 388 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 FRG2BQ96QU4 278 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 KCNA7Q96RP8 456 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 CNPPD1Q9BV87 410 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 RPF2Q9H7B2 306 aaKnown RBP11.19□□□□□ -0.62
TPM1-216ENST00000558910 LYRM4Q9HD34 91 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 ADAP2Q9NPF8 381 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 ADGRE2Q9UHX3 823 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 ZNF223Q9UK11 482 aaPredicted RBP11.19□□□□□ -0.62
TPM1-216ENST00000558910 TMCO1Q9UM00 188 aa11.19□□□□□ -0.62
TPM1-216ENST00000558910 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
TPM1-216ENST00000558910 A0A1W2PS29 197 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 HRKO00198 91 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 OR10H2O60403 315 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 ITGA10O75578 1167 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 RPS17P08708 135 aaKnown RBP11.18□□□□□ -0.62
TPM1-216ENST00000558910 FAM58BPP0C7Q3 252 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 MST1P26927 711 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 HMOX2P30519 316 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 TLX1P31314 330 aaPredicted RBP11.18□□□□□ -0.62
TPM1-216ENST00000558910 BSGP35613 385 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 HSD17B3P37058 310 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 BUD31P41223 144 aaPredicted RBP11.18□□□□□ -0.62
TPM1-216ENST00000558910 MLF1P58340 268 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 GPR85P60893 370 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 TNFRSF17Q02223 184 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 IFFO1Q0D2I5 559 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 E2F2Q14209 437 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 ZNF750Q32MQ0 723 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 ZNF678Q5SXM1 525 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 CCNYL2Q5T2Q4 361 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 C1QL3Q5VWW1 255 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 SLC25A25Q6KCM7 469 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 H3F3CQ6NXT2 135 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 FAM180BQ6P0A1 224 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 IL20RBQ6UXL0 311 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 GFRALQ6UXV0 394 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 NUDT13Q86X67 352 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 MMP21Q8N119 569 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 TMEM132CQ8N3T6 1108 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 TMEM151AQ8N4L1 468 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 APCDD1LQ8NCL9 501 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 CDC26Q8NHZ8 85 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 SLC2A12Q8TD20 617 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 PTPMT1Q8WUK0 201 aaPredicted RBP11.18□□□□□ -0.62
TPM1-216ENST00000558910 GTPBP3Q969Y2 492 aaKnown RBP11.18□□□□□ -0.62
TPM1-216ENST00000558910 ANKRD9Q96BM1 317 aaPredicted RBP11.18□□□□□ -0.62
TPM1-216ENST00000558910 VMP1Q96GC9 406 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 SERPINI1Q99574 410 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 TEX10Q9NXF1 929 aaPredicted RBP11.18□□□□□ -0.62
TPM1-216ENST00000558910 ERVK-11Q9UQG0 969 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 FIS1Q9Y3D6 152 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 TIMM22Q9Y584 194 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 CLDN16Q9Y5I7 305 aa11.18□□□□□ -0.62
TPM1-216ENST00000558910 A0A1W2PR48 441 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 CCDC189A1A4V9 331 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 NPIPA5E9PKD4 350 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 FCHO1O14526 889 aa11.17□□□□□ -0.62
TPM1-216ENST00000558910 COPEO14579 308 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms