RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ZNF226Q9NYT6 803 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 COPS7AQ9UBW8 275 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 TRMT6Q9UJA5 497 aaKnown RBP4.76□□□□□ -1.65
SPG11-208ENST00000558155 ADAMTS6Q9UKP5 1117 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 TFR2Q9UP52 801 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 CAMK2AQ9UQM7 478 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 DYRK1BQ9Y463 629 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 DOCK7Q96N67 2140 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 KIAA1549Q9HCM3 1950 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 NCKAP5O14513 1909 aa4.76□□□□□ -1.65
SPG11-208ENST00000558155 A0A1W2PPR1 153 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 TCRBV7S2A1N4TA0A589 114 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SYCE3A1L190 88 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 MBD3L3A6NE82 208 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 BTNL10A8MVZ5 291 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CAPN14A8MX76 684 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 A8MXE2 369 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 TP53I11O14683 189 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CLGNO14967 610 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 DYRK3O43781 588 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 ZNF354AO60765 605 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 TMCC2O75069 709 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 RCBTB2O95199 551 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 ACSL3O95573 720 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 F12P00748 615 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 TP53P04637 393 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 CYP4B1P13584 511 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 COX7A2P14406 83 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 GCKP35557 465 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 MC3RP41968 323 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 AP1S2P56377 157 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 WNT3P56703 355 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 BASP1P80723 227 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 DHX9Q08211 1270 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 CRYZQ08257 329 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 ASPHQ12797 758 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SP140Q13342 867 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 GAB1Q13480 694 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SNX1Q13596 522 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 DHX34Q14147 1143 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 NHSL2Q5HYW2 709 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 TBCELQ5QJ74 424 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 ZNF470Q6ECI4 717 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 VASNQ6EMK4 673 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CASC4Q6P4E1 433 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 ZNF549Q6P9A3 640 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 NXPE4Q6UWF7 544 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 MBOAT1Q6ZNC8 495 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 PLEKHM3Q6ZWE6 761 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CLNKQ7Z7G1 428 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 LUZP2Q86TE4 346 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 PRUNE1Q86TP1 453 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CAND1Q86VP6 1230 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 LMNTD2Q8IXW0 634 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 KLHDC8AQ8IYD2 350 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SVOPQ8N4V2 548 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 ANKRD53Q8N9V6 530 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 TTLQ8NG68 377 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 MBD3L2Q8NHZ7 208 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 NUBPLQ8TB37 319 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 ZPLD1Q8TCW7 415 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SLC2A12Q8TD20 617 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CD200R1Q8TD46 325 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 C1orf54Q8WWF1 131 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SREK1Q8WXA9 508 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 ATG4AQ8WYN0 398 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CCT6BQ92526 530 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 UCN3Q969E3 161 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 NEIL2Q969S2 332 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 GAL3ST3Q96A11 431 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 PYCR2Q96C36 320 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SPACA9Q96E40 222 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 RBM18Q96H35 190 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 SENP5Q96HI0 755 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 RUNDC3BQ96NL0 473 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 OR4K3Q96R72 315 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SERINC2Q96SA4 455 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 TM9SF2Q99805 663 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 WDR83Q9BRX9 315 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 DOHHQ9BU89 302 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SFXN3Q9BWM7 321 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 GSX2Q9BZM3 304 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 PRDM14Q9GZV8 571 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 ACBD3Q9H3P7 528 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 UBTD1Q9HAC8 227 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 PELI2Q9HAT8 420 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 SH2D2AQ9NP31 389 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 FBXO6Q9NRD1 293 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 SYBUQ9NX95 663 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 TRMT1Q9NXH9 659 aaKnown RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 GALNT8Q9NY28 637 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 TAS2R13Q9NYV9 303 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 MED16Q9Y2X0 877 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 CLDN16Q9Y5I7 305 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 NPFFR2Q9Y5X5 522 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 EPN1Q9Y6I3 576 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 KCNE2Q9Y6J6 123 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 IKBKGQ9Y6K9 419 aa4.75□□□□□ -1.65
SPG11-208ENST00000558155 MAP1AP78559 2803 aaPredicted RBP4.75□□□□□ -1.65
SPG11-208ENST00000558155 NSD1Q96L73 2696 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms