RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 MPIP34949 423 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 CPOXP36551 454 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 FRKP42685 505 aaPredicted RBP15.88■□□□□ 0.13
SNX1-203ENST00000558040 MANFP55145 182 aaKnown RBP15.88■□□□□ 0.13
SNX1-203ENST00000558040 PCBP4P57723 403 aaKnown RBP15.88■□□□□ 0.13
SNX1-203ENST00000558040 SLC25A3Q00325 362 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 PLIN5Q00G26 463 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 MLC1Q15049 377 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 SYT16Q17RD7 645 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 MPEG1Q2M385 716 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 NKAIN1Q4KMZ8 207 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 TMEM164Q5U3C3 297 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 MED25Q71SY5 747 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 ARPINQ7Z6K5 226 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 CLECL1Q8IZS7 167 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 TRIML2Q8N7C3 387 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 C7orf57Q8NEG2 295 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 OR4A15Q8NGL6 344 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 FBXO27Q8NI29 283 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.88■□□□□ 0.13
SNX1-203ENST00000558040 OR5P2Q8WZ92 322 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 UCN3Q969E3 161 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 LRRC58Q96CX6 371 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 LRFN5Q96NI6 719 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 DPH2Q9BQC3 489 aaPredicted RBP15.88■□□□□ 0.13
SNX1-203ENST00000558040 RBCK1Q9BYM8 510 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 IL1RL2Q9HB29 575 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 SERHLQ9NQF3 203 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 PRTFDC1Q9NRG1 225 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 RAPGEFL1Q9UHV5 662 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 VPS4AQ9UN37 437 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 MYO1GB0I1T2 1018 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 NVLO15381 856 aaKnown RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 CPSF4O95639 269 aaKnown RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 GPR75O95800 540 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 C6orf47O95873 294 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 ONECUT2O95948 504 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 KLK3P07288 261 aaPredicted RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 RORAP35398 523 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 ETV5P41161 510 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 NCBP2P52298 156 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNX1-203ENST00000558040 HSD17B7P56937 341 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 PSME3P61289 254 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 FOLH1Q04609 750 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 SLC13A2Q13183 592 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 CEBPEQ15744 281 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 PRSS53Q2L4Q9 553 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 LRIF1Q5T3J3 769 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 DNAJC14Q6Y2X3 702 aaPredicted RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 ASRGL1Q7L266 308 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 DEFB107AQ8IZN7 70 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 ARHGAP24Q8N264 748 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 LRRC25Q8N386 305 aaPredicted RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 GALNT15Q8N3T1 639 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 SLC38A9Q8NBW4 561 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 GOT1L1Q8NHS2 421 aaPredicted RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 MCUR1Q96AQ8 359 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 MIEF2Q96C03 454 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 CNRIP1Q96F85 164 aaPredicted RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 CGREF1Q99674 301 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 SH3GL1Q99961 368 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 INPP5KQ9BT40 448 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 PAIP1Q9H074 479 aaKnown RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 TAS2R9Q9NYW1 312 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 ZNF282Q9UDV7 671 aaPredicted RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.87■□□□□ 0.13
SNX1-203ENST00000558040 MMACHCQ9Y4U1 282 aa15.87■□□□□ 0.13
SNX1-203ENST00000558040 MEN1O00255 615 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 B4GALT2O60909 372 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 CTNSO60931 367 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 DNAJC8O75937 253 aaPredicted RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 KCNK5O95279 499 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 ABCB1P08183 1280 aaPredicted RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 ZCCHC18P0CG32 403 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 EFNA1P20827 205 aaPredicted RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 GPC1P35052 558 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 FEN1P39748 380 aaKnown RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 XKP51811 444 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 OCA2Q04671 838 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 TARDBPQ13148 414 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNX1-203ENST00000558040 BIKQ13323 160 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 C3orf38Q5JPI3 329 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 ZNF385CQ66K41 422 aaPredicted RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 DLEU7Q6UYE1 221 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 BNC2Q6ZN30 1099 aaPredicted RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 ZNF621Q6ZSS3 439 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 TMEM52Q8NDY8 209 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 ADAMTS14Q8WXS8 1223 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 FKBP10Q96AY3 582 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 ZNF681Q96N22 645 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 AMDHD1Q96NU7 426 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 MMADHCQ9H3L0 296 aaPredicted RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 GLIPR2Q9H4G4 154 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 SPAG4Q9NPE6 437 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 SLAMF7Q9NQ25 335 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 C14orf105Q9NVL8 296 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 IFT80Q9P2H3 777 aaPredicted RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 PRPF19Q9UMS4 504 aaKnown RBP15.86■□□□□ 0.13
SNX1-203ENST00000558040 SATB2Q9UPW6 733 aa15.86■□□□□ 0.13
SNX1-203ENST00000558040 PCDHGA3Q9Y5H0 932 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms