RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 C9orf40Q8IXQ3 194 aa16.85■□□□□ 0.29
ABCD4-228ENST00000557588 SMPDL3BQ92485 455 aa16.85■□□□□ 0.29
ABCD4-228ENST00000557588 CCT6BQ92526 530 aa16.85■□□□□ 0.29
ABCD4-228ENST00000557588 PRDM14Q9GZV8 571 aa16.85■□□□□ 0.29
ABCD4-228ENST00000557588 COPS7BQ9H9Q2 264 aaPredicted RBP16.85■□□□□ 0.29
ABCD4-228ENST00000557588 CNIH4Q9P003 139 aa16.85■□□□□ 0.29
ABCD4-228ENST00000557588 GUCA1BQ9UMX6 200 aa16.85■□□□□ 0.29
ABCD4-228ENST00000557588 CHCHD2Q9Y6H1 151 aaPredicted RBP16.85■□□□□ 0.29
ABCD4-228ENST00000557588 FBN1P35555 2871 aaKnown RBP16.84■□□□□ 0.29
ABCD4-228ENST00000557588 C15orf38-AP3S2A0A0A6YYH1 394 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 LDB3O75112 727 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 IGKV3-11P04433 115 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 TNNI3P19429 210 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 PCSK6P29122 969 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 TRPC1P48995 793 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 CDKL1Q00532 357 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 DUSP8Q13202 625 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 NSUN5P2Q63ZY6 315 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 VN1R5Q7Z5H4 357 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 PM20D2Q8IYS1 436 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 LRRC75A-AS1Q8N1F1 130 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 CIARTQ8N365 385 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-228ENST00000557588 SLC15A4Q8N697 577 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 RUNDC3BQ96NL0 473 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 WDR83Q9BRX9 315 aaKnown RBP16.84■□□□□ 0.29
ABCD4-228ENST00000557588 PITHD1Q9GZP4 211 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-228ENST00000557588 NT5DC2Q9H857 520 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 LYRM4Q9HD34 91 aa16.84■□□□□ 0.29
ABCD4-228ENST00000557588 RYDENQ9NUL5 291 aaKnown RBP16.84■□□□□ 0.29
ABCD4-228ENST00000557588 CORO1CQ9ULV4 474 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-228ENST00000557588 MBD3L4A6NDZ8 208 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 MBD3L3A6NE82 208 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 MBD3L5A6NJ08 208 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 CD8B2A6NJW9 211 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 EEF1E1-BLOC1S5C9J1V9 151 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 EEF1E1O43324 174 aaKnown RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 H2AFYO75367 372 aaKnown RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 IL18BPO95998 194 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 ZNF37AP17032 561 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 HNMTP50135 292 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 POU4F3Q15319 338 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 TTC27Q6P3X3 843 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 RASGEF1CQ8N431 466 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 NAT8LQ8N9F0 302 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 SIMC1Q8NDZ2 872 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 OR10G3Q8NGC4 313 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 MBD3L2Q8NHZ7 208 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 NANOS1Q8WY41 292 aaKnown RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 ZNF592Q92610 1267 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 ZNF597Q96LX8 424 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 DOCK7Q96N67 2140 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 DACH2Q96NX9 599 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 TIMP4Q99727 224 aa16.83■□□□□ 0.28
ABCD4-228ENST00000557588 CNOT11Q9UKZ1 510 aaKnown RBP16.83■□□□□ 0.28
ABCD4-228ENST00000557588 FREM3P0C091 2139 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 H7C1Q1 480 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 WDR47O94967 919 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 FBXO45P0C2W1 286 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 COX7A2P14406 83 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 CTSSP25774 331 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 GDF1P27539 372 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 OPRM1P35372 400 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 SLC6A12P48065 614 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 IGLV3-21P80748 117 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-228ENST00000557588 SF3B4Q15427 424 aaKnown RBP eCLIP16.82■□□□□ 0.285e-8■■■■■ 42.9
ABCD4-228ENST00000557588 ADNP2Q6IQ32 1131 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 FAM45BPQ6NSW5 357 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 KRT78Q8N1N4 520 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 FAM13CQ8NE31 585 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 C7orf57Q8NEG2 295 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 FAM45AQ8TCE6 357 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 ANKRD7Q92527 254 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 PIP5K1AQ99755 562 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 DOHHQ9BU89 302 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 EHD1Q9H4M9 534 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 PRDM7Q9NQW5 492 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 SLC17A6Q9P2U8 582 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 VWA7Q9Y334 891 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 IKBKGQ9Y6K9 419 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 RTTNQ86VV8 2226 aa16.82■□□□□ 0.28
ABCD4-228ENST00000557588 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 ANKDD1BA6NHY2 528 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 CDC7O00311 574 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 TRIM3O75382 744 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-228ENST00000557588 TTC4O95801 387 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 C1QAP02745 245 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 STT3AP46977 705 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 KCNC1P48547 511 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 ID2Q02363 134 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 TGM3Q08188 693 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 NHSL2Q5HYW2 709 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 SPANXN3Q5MJ09 141 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 TBCELQ5QJ74 424 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 VASNQ6EMK4 673 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 P3H2Q8IVL5 708 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 LRRN4CLQ8ND94 238 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 ISL2Q96A47 359 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 ANKRD9Q96BM1 317 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-228ENST00000557588 NTNG2Q96CW9 530 aa16.81■□□□□ 0.28
ABCD4-228ENST00000557588 CERS2Q96G23 380 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms