RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 OGDHQ02218 1023 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PPIDQ08752 370 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PDK2Q15119 407 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CA9Q16790 459 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 GRAMD1BQ3KR37 738 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CCDC153Q494R4 210 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PDCD4Q53EL6 469 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ANKRD39Q53RE8 183 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PPP6R3Q5H9R7 873 aaPredicted RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 METRNLQ641Q3 311 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 LPCAT4Q643R3 524 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ATG9BQ674R7 924 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 HMBOX1Q6NT76 420 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PODNL1Q6PEZ8 512 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 VHLLQ6RSH7 139 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PACS1Q6VY07 963 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 C16orf47Q6ZP98 133 aaPredicted RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM83HQ6ZRV2 1179 aaPredicted RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 C22orf34Q6ZV56 151 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 TTLL10Q6ZVT0 673 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 NDUFAF7Q7L592 441 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 IGDCC3Q8IVU1 814 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 MAP7D3Q8IWC1 876 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PPM1NQ8N819 430 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 SMYD1Q8NB12 490 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM98AQ8NCA5 519 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ACVR1CQ8NER5 493 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ZFP28Q8NHY6 868 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ADAMTS16Q8TE57 1224 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 RNF141Q8WVD5 230 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PYDC1Q8WXC3 89 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 VPS35Q96QK1 796 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 SECISBP2Q96T21 854 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 EBNA1BP2Q99848 306 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CNPY3Q9BT09 278 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CRB3Q9BUF7 120 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ASPNQ9BXN1 380 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CHRNA10Q9GZZ6 450 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM60AQ9NP50 221 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 C8orf4Q9NR00 106 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 MOCS1Q9NZB8 636 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ZC3H7BQ9UGR2 993 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 RSL24D1Q9UHA3 163 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 TEKT2Q9UIF3 430 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ACSL5Q9ULC5 683 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PAIP2BQ9ULR5 123 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 HEBP2Q9Y5Z4 205 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 AP4B1Q9Y6B7 739 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CEPT1Q9Y6K0 416 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 DNAJC13O75165 2243 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ASPDHA6ND91 283 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 A6NNC1 897 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ANKRD66B4E2M5 251 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 BTN3A3O00478 584 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 TXNDC9O14530 226 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PDPK1O15530 556 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNHIT1O43257 154 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 HCRTR1O43613 425 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PRPSAP2O60256 369 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 BANF1O75531 89 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 OR6B1O95007 311 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CRTAMO95727 393 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ONECUT2O95948 504 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 MT-CYBP00156 380 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 IFNA2P01563 188 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC4A1P02730 911 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 COX6A1P12074 109 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ETS2P15036 469 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 TCF4P15884 667 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PORP16435 677 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF12P17014 697 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CDH2P19022 906 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PBLDP30039 288 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 MAGEA12P43365 314 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 KIR2DL3P43628 341 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 GABRA4P48169 554 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CD151P48509 253 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 HCAR3P49019 387 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF135P52742 658 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ABCE1P61221 599 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 HSF1Q00613 529 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 MYBPC1Q00872 1141 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 DSC2Q02487 901 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF33BQ06732 778 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 KLF10Q13118 480 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PCBP2Q15366 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CPSF6Q16630 551 aaKnown RBP eCLIP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 FASTKD1Q53R41 847 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 TXNRD3NBQ6F5E7 133 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 DARS2Q6PI48 645 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 SPESP1Q6UW49 350 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 EPGNQ6UW88 154 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 ARSKQ6UWY0 536 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 COX15Q7KZN9 410 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CAND1Q86VP6 1230 aaKnown RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 PAQR7Q86WK9 346 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 RFX6Q8HWS3 928 aa6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CCDC71Q8IV32 467 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 CDKL3Q8IVW4 592 aaPredicted RBP6.41□□□□□ -1.38
SPTLC2-206ENST00000557566 SIAH3Q8IW03 269 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms