RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SKILP12757 684 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 CPN1P15169 458 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 PPP3CBP16298 524 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 HSD17B2P37059 387 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 KIR2DL2P43627 348 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 RPL21P46778 160 aaKnown RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 HNRNPFP52597 415 aaKnown RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 RAB8AP61006 207 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 IRX1P78414 480 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 UBXN1Q04323 297 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 MPEG1Q2M385 716 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF672Q499Z4 452 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 FNDC7Q5VTL7 733 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 CDKAL1Q5VV42 579 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 AFTPHQ6ULP2 937 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 SBSNQ6UWP8 590 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 DTX2Q86UW9 622 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 CCDC50Q8IVM0 306 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 LRRC56Q8IYG6 542 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF610Q8N9Z0 462 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 MFSD9Q8NBP5 474 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 TMEM52Q8NDY8 209 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 FAM83FQ8NEG4 500 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 KBTBD8Q8NFY9 601 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 OR5L2Q8NGL0 311 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 OR8K3Q8NH51 312 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 PTPMT1Q8WUK0 201 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 PROX1Q92786 737 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF845Q96IR2 970 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 RUNDC3BQ96NL0 473 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 PANX3Q96QZ0 392 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 PANX2Q96RD6 677 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 BHLHE41Q9C0J9 482 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 PRTFDC1Q9NRG1 225 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 HEY2Q9UBP5 337 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 WBP11Q9Y2W2 641 aaKnown RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 NINQ8N4C6 2090 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 MROH6A6NGR9 719 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 PLOD2O00469 737 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 PRMT5O14744 637 aaPredicted RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 PSIP1O75475 530 aaKnown RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 SYF2O95926 243 aaKnown RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 RBP3P10745 1247 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 APEHP13798 732 aaKnown RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 CHMP24386 653 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 HRH2P25021 359 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 PSMA3P25788 255 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 HNF4AP41235 474 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 MASP1P48740 699 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 CCZ1BP86790 482 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 CCZ1P86791 482 aaPredicted RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 KLHL30Q0D2K2 578 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 SLC13A2Q13183 592 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 PRPSAP1Q14558 356 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 NIPAL1Q6NVV3 410 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 SCIMPQ6UWF3 145 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 MFSD7Q6UXD7 560 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF534Q76KX8 674 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 P4HA3Q7Z4N8 544 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 PEG10Q86TG7 708 aaKnown RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 MORN4Q8NDC4 146 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 OR13J1Q8NGT2 312 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 OR14A16Q8NHC5 309 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 SLC2A12Q8TD20 617 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 UTP15Q8TED0 518 aaKnown RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 DIO2Q92813 273 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 DAZLQ92904 295 aaKnown RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 TP53INP1Q96A56 240 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 C3orf49Q96BT1 292 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 FAM136AQ96C01 138 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 ADAD1Q96M93 576 aaKnown RBP8.47□□□□□ -1.05
NEDD1-211ENST00000557454 RILPQ96NA2 401 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 ERGIC2Q96RQ1 377 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 CACNG6Q9BXT2 260 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 FAM129AQ9BZQ8 928 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 FAM114A2Q9NRY5 505 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 SLC2A6Q9UGQ3 507 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 MYO6Q9UM54 1294 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 IKBKGQ9Y6K9 419 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 CADP27708 2225 aa8.47□□□□□ -1.05
NEDD1-211ENST00000557454 ESPNB1AK53 854 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 C4orf51C9J302 202 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 TRIM77I1YAP6 450 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 EIF3FO00303 357 aaPredicted RBP8.46□□□□□ -1.06
NEDD1-211ENST00000557454 HCRTR2O43614 444 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 CST8O60676 142 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 CATP04040 527 aaKnown RBP8.46□□□□□ -1.06
NEDD1-211ENST00000557454 CD3EP07766 207 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 VSIG8P0DPA2 414 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 CDH1P12830 882 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 PAMP19021 973 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 RBL1P28749 1068 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 IMPA1P29218 277 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 GRK3P35626 688 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 GMPRP36959 345 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 TBPL1P62380 186 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 PCDH1Q08174 1060 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 LGALS3BPQ08380 585 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 ZNF844Q08AG5 666 aa8.46□□□□□ -1.06
NEDD1-211ENST00000557454 PWP1Q13610 501 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms