RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ARHGAP19Q14CB8 494 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 TCTE1Q5JU00 501 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 SWT1Q5T5J6 900 aaKnown RBP11.77□□□□□ -0.53
SHMT2-230ENST00000557427 ICE2Q659A1 982 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 SULT1C3Q6IMI6 304 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 OGFOD2Q6N063 350 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 AAGABQ6PD74 315 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 RIPOR1Q6ZS17 1223 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 GPRIN3Q6ZVF9 776 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 ADCK2Q7Z695 626 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 PGAM4Q8N0Y7 254 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 FBXW8Q8N3Y1 598 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 DTWD1Q8N5C7 304 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 TTC29Q8NA56 475 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-230ENST00000557427 PROKR1Q8TCW9 393 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 MCOLN3Q8TDD5 553 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-230ENST00000557427 DLG3Q92796 817 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 MARK4Q96L34 752 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 C3orf30Q96M34 536 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 ANKRD27Q96NW4 1050 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 SERPINI1Q99574 410 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-230ENST00000557427 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-230ENST00000557427 PTBP2Q9UKA9 531 aaKnown RBP11.77□□□□□ -0.53
SHMT2-230ENST00000557427 MEMO1Q9Y316 297 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 MAU2Q9Y6X3 613 aa11.77□□□□□ -0.53
SHMT2-230ENST00000557427 HYKKA2RU49 373 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 NCF1BA6NI72 391 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 NCF1CA8MVU1 366 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 H7BY64 318 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 AIM2O14862 343 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 FKBP6O75344 327 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 CRCPO75575 148 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 CD63P08962 238 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 ENO2P09104 434 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 PRR35P0CG20 571 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 NCF1P14598 390 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 IGFBP2P18065 325 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 LBPP18428 481 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 MTTPP55157 894 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 FOXA1P55317 472 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 STX1BP61266 288 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 PRDX1Q06830 199 aaKnown RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 INAQ16352 499 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 RBBP7Q16576 425 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 FAM214AQ32MH5 1076 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 XKR7Q5GH72 579 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 MBOAT1Q6ZNC8 495 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 SPATA19Q7Z5L4 167 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 MYLK4Q86YV6 388 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 FBXO15Q8NCQ5 510 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 CHDHQ8NE62 594 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 PSMF1Q92530 271 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 JADE3Q92613 823 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 NACC2Q96BF6 587 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 RCN3Q96D15 328 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 PRAP1Q96NZ9 151 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 ATG10Q9H0Y0 220 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 TUBB1Q9H4B7 451 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 AKTIPQ9H8T0 292 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 PARVBQ9HBI1 364 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 STX18Q9P2W9 335 aaKnown RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 STOML1Q9UBI4 398 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 PDE10AQ9Y233 779 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 ZNF835Q9Y2P0 537 aa11.76□□□□□ -0.53
SHMT2-230ENST00000557427 FBN1P35555 2871 aaKnown RBP11.76□□□□□ -0.53
SHMT2-230ENST00000557427 SNRNP200O75643 2136 aaKnown RBP11.75□□□□□ -0.53
SHMT2-230ENST00000557427 TRAV17A0A0B4J275 112 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 IGKV1-8A0A0C4DH67 115 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 A0A1B0GX78 115 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 OR2A25A4D2G3 310 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 H0YGG7 62 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 DSCR3O14972 297 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 SLC16A5O15375 505 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 KRT36O76013 467 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 ANP32DO95626 131 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 F10P00742 488 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 C8GP07360 202 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-230ENST00000557427 ERGP11308 486 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 PIM1P11309 404 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-230ENST00000557427 FOSL1P15407 271 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 GPX3P22352 226 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 IMPA1P29218 277 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 ARF3P61204 181 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-230ENST00000557427 ARG2P78540 354 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 CDKL1Q00532 357 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 NAE1Q13564 534 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 GTF2H2Q13888 395 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 RCN1Q15293 331 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 GSTA3Q16772 222 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 AGKQ53H12 422 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 IRAK1BP1Q5VVH5 260 aa11.75□□□□□ -0.53
SHMT2-230ENST00000557427 GTF2H2CQ6P1K8 395 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms