RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ZNF451Q9Y4E5 1061 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 A3GALT2U3KPV4 340 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 COL6A3P12111 3177 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 BRWD1Q9NSI6 2320 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 IGHV1OR15-9A0A0B4J2B8 117 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 C2orf74A8MZ97 194 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 PLOD2O00469 737 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 UGT2B11O75310 529 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 PRKD3O94806 890 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 C6orf47O95873 294 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 GBAP04062 536 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 SERPIND1P05546 499 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 ZNF182P17025 639 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 CD27P26842 260 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 PEBP1P30086 187 aaKnown RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 NTSP30990 170 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 KDELR2P33947 212 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 CHI3L1P36222 383 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 MAGEA2P43356 314 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 ANXA11P50995 505 aaKnown RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 ALDH3A2P51648 485 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 HBA1P69905 142 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 UBXN2BQ14CS0 331 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 ZNF630Q2M218 657 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 RFX4Q33E94 735 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 PRRT3Q5FWE3 981 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 TJAP1Q5JTD0 557 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 GCNT6Q5T4J0 391 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 EIF3MQ7L2H7 374 aaKnown RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 PRSS48Q7RTY5 328 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 THAP5Q7Z6K1 395 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 PAQR7Q86WK9 346 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 NRROSQ86YC3 692 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 SAMD14Q8IZD0 417 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 SDR16C5Q8N3Y7 309 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 TMCO5AQ8N6Q1 288 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 NT5CQ8TCD5 201 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 PHF10Q8WUB8 498 aaKnown RBP12.01□□□□□ -0.49
SHMT2-229ENST00000557348 ZNF566Q969W8 418 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 GAL3ST3Q96A11 431 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 MS4A6EQ96DS6 147 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 TXNDC15Q96J42 360 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 SLC6A16Q9GZN6 736 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 CHST8Q9H2A9 424 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 CPNE7Q9UBL6 633 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 ENPP5Q9UJA9 477 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 DOLKQ9UPQ8 538 aa12.01□□□□□ -0.49
SHMT2-229ENST00000557348 OR2A25A4D2G3 310 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 GNGT2O14610 69 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 HAT1O14929 419 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 LCMT2O60294 686 aaKnown RBP12□□□□□ -0.49
SHMT2-229ENST00000557348 DPM1O60762 260 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 KLHL18O94889 574 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 CST1P01037 141 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 CCDC159P0C7I6 412 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 HIST1H1TP22492 207 aaPredicted RBP12□□□□□ -0.49
SHMT2-229ENST00000557348 TGM1P22735 817 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 ARHGDIAP52565 204 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 UBE2IP63279 158 aaKnown RBP12□□□□□ -0.49
SHMT2-229ENST00000557348 EIF2B5Q13144 721 aaKnown RBP12□□□□□ -0.49
SHMT2-229ENST00000557348 GAB1Q13480 694 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 FZD2Q14332 565 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 MANEAQ5SRI9 462 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 ABHD17CQ6PCB6 329 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 BHLHB9Q6PI77 547 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 PLEKHG7Q6ZR37 379 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 CBLL1Q75N03 491 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 TAF8Q7Z7C8 310 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SLC22A18ASQ8N1D0 253 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SPEM1Q8N4L4 309 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 FBXL6Q8N531 539 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 PSMA8Q8TAA3 256 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 NETO1Q8TDF5 533 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 CYGBQ8WWM9 190 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 RSC1A1Q92681 617 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 MOAP1Q96BY2 351 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SPACA7Q96KW9 195 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 GIMAP4Q9NUV9 329 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SPHK1Q9NYA1 384 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 NPAP1Q9NZP6 1156 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 FAM170BA6NMN3 283 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 METTL12A8MUP2 240 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 YY2O15391 372 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 ERI3O43414 337 aaKnown RBP12□□□□□ -0.49
SHMT2-229ENST00000557348 B3GALT4O96024 378 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SOX11P35716 441 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 PRIM2P49643 509 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 MANFP55145 182 aaKnown RBP12□□□□□ -0.49
SHMT2-229ENST00000557348 MC1RQ01726 317 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 MVKQ03426 396 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SLC14A1Q13336 389 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SIM2Q14190 667 aaPredicted RBP12□□□□□ -0.49
SHMT2-229ENST00000557348 GPR18Q14330 331 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 ELOCQ15369 112 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 TMEM31Q5JXX7 168 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 KIAA1614Q5VZ46 1190 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 ANGPTL8Q6UXH0 198 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 SLC36A4Q6YBV0 504 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 ASPGQ86U10 573 aa12□□□□□ -0.49
SHMT2-229ENST00000557348 OOSP2Q86WS3 158 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms