RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ACAA2P42765 397 aaKnown RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 XGP55808 180 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 MYBPC1Q00872 1141 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 HNRNPDQ14103 355 aaKnown RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 OR1C1Q15619 314 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 SPANXN4Q5MJ08 99 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 FFAR4Q5NUL3 377 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 GALNT17Q6IS24 598 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 CAPN13Q6MZZ7 669 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 TMEM26Q6ZUK4 368 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 Q71RC1 249 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 BNIPLQ7Z465 357 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 CNPY4Q8N129 248 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 SPEM1Q8N4L4 309 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 GOLGA5Q8TBA6 731 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 GPR148Q8TDV2 347 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 DQX1Q8TE96 717 aaKnown RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 SMAP2Q8WU79 429 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 TCP11Q8WWU5 503 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF524Q96C55 264 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 C2orf48Q96LS8 159 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 ERGIC2Q96RQ1 377 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 CBWD1Q9BRT8 395 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 THUMPD2Q9BTF0 503 aaKnown RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 PAPOLGQ9BWT3 736 aaKnown RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 WWP1Q9H0M0 922 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 RIBC2Q9H4K1 309 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 MTHFD2LQ9H903 347 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 LNPEPQ9UIQ6 1025 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 ENTPD4Q9Y227 616 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 TCF19Q9Y242 345 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 SMG6Q86US8 1419 aaKnown RBP3.76□□□□□ -1.81
PRPF39-210ENST00000556718 SPATA31D1Q6ZQQ2 1576 aa3.76□□□□□ -1.81
PRPF39-210ENST00000556718 A0A087WW49 117 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 F8WDY8 70 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF195O14628 629 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 KIAA0513O60268 411 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 ZG16O60844 167 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 LRP3O75074 770 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 DIRAS3O95661 229 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 TBX6O95947 436 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 PRSS56P0CW18 603 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 NCF1P14598 390 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 GPX3P22352 226 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 PRDX6P30041 224 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 CHRNB4P30926 498 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 GPR183P32249 361 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MAP2K2P36507 400 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MDH1P40925 334 aaKnown RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MAGEA4P43358 317 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 CCL11P51671 97 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 GABPB1Q06547 395 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MFGE8Q08431 387 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 PDZK1IP1Q13113 114 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MSLNQ13421 630 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 PDIA5Q14554 519 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 EXOSC7Q15024 291 aaKnown RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 LDLRAP1Q5SW96 308 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 RIPPLY2Q5TAB7 128 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 ARHGAP17Q68EM7 881 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 CDC42EP5Q6NZY7 148 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 FIP1L1Q6UN15 594 aaKnown RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 FAM159AQ6UWV7 190 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 Q6ZVQ6 151 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 ZER1Q7Z7L7 766 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 YRDCQ86U90 279 aaKnown RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MISPQ8IVT2 679 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 SLC22A15Q8IZD6 547 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 RPLP0P6Q8NHW5 317 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 C8orf46Q8TAG6 207 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 PHYHIPQ92561 330 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MRPL53Q96EL3 112 aaKnown RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 C16orf58Q96GQ5 468 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 VPS39Q96JC1 886 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 FICDQ9BVA6 458 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 CCDC94Q9BW85 323 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 EGLN1Q9GZT9 426 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 ECT2Q9H8V3 914 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 ROPN1Q9HAT0 212 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 VAT1LQ9HCJ6 419 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 SCRT2Q9NQ03 307 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 GDF3Q9NR23 364 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 FAM212BQ9NTI7 297 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 TEX10Q9NXF1 929 aaPredicted RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 DIMT1Q9UNQ2 313 aaKnown RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 MGAT4BQ9UQ53 548 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.75□□□□□ -1.81
PRPF39-210ENST00000556718 ZHX2Q9Y6X8 837 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 NCAPD2Q15021 1401 aa3.75□□□□□ -1.81
PRPF39-210ENST00000556718 A0A087WZY1 265 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 TMEM89A2RUT3 159 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 TMCO5BA8MYB1 307 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 LMO7DNF2Z398 122 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 LGALS8O00214 317 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 P2RX6O15547 441 aa3.74□□□□□ -1.81
PRPF39-210ENST00000556718 FRAT2O75474 233 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 MTRF1O75570 445 aaKnown RBP3.74□□□□□ -1.81
PRPF39-210ENST00000556718 IDH1O75874 414 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms