RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 RGS1Q08116 209 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 CNPY1Q3B7I2 92 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 SAXO2Q658L1 398 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 MRM1Q6IN84 353 aaKnown RBP17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 SVOPLQ8N434 492 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 NEURL3Q96EH8 262 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 DOHHQ9BU89 302 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 TMEM38AQ9H6F2 299 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 NEUROD4Q9HD90 331 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 RAB23Q9ULC3 237 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 PCDHGA2Q9Y5H1 932 aa17.33■□□□□ 0.37
SDR39U1-220ENST00000556548 CLPTM1O96005 669 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 SLC35G6P0C7Q6 338 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 PPP2R2BQ00005 443 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 RPL6Q02878 288 aaKnown RBP17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 FOXD4Q12950 439 aaPredicted RBP17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 DEFB134Q4QY38 66 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 SATL1Q86VE3 508 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 TMEFF1Q8IYR6 380 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 SHISA5Q8N114 240 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 SRFBP1Q8NEF9 429 aaKnown RBP17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 UTP15Q8TED0 518 aaKnown RBP17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 RAD21L1Q9H4I0 556 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 TMEM165Q9HC07 324 aa17.33■□□□□ 0.36
SDR39U1-220ENST00000556548 KIR2DS5A0A0G2JLQ3 304 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 A0A0G2JNG1 304 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 C2orf74A8MZ97 194 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 KIR2DS3K7RE56 304 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 H6PDO95479 791 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 BCHEP06276 602 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 GSTM5P46439 218 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 CDH15P55291 814 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 MAZP56270 477 aaKnown RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 SELENOWP63302 87 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 ADARB1P78563 741 aaKnown RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 IL1RL1Q01638 556 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 KIR2DS5Q14953 304 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 TTC33Q6PID6 262 aaPredicted RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 GALNT5Q7Z7M9 940 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 RSC1A1Q92681 617 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 CNRIP1Q96F85 164 aaPredicted RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 RMND5BQ96G75 393 aaPredicted RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 MUS81Q96NY9 551 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 YIPF4Q9BSR8 244 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 TM9SF3Q9HD45 589 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 A0A1W2PPC1 479 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 PROM1O43490 865 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 TNFSF14O43557 240 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 ARAFP10398 606 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 DDX5P17844 614 aaKnown RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 CD38P28907 300 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 BLKP51451 505 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 STARD6P59095 220 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 OLR1P78380 273 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 RBBP4Q09028 425 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 NATD1Q8N6N6 113 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 OR5D16Q8NGK9 328 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 POP5Q969H6 163 aaKnown RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 C7orf34Q96L11 122 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 RBM4BQ9BQ04 359 aaKnown RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 RBM4Q9BWF3 364 aaKnown RBP17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 GRIP2Q9C0E4 1043 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 RUBCNLQ9H714 662 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 ANKRA2Q9H9E1 313 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 STARD5Q9NSY2 213 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 TMEM74BQ9NUR3 256 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 TAS2R7Q9NYW3 318 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 COMMD3-BMI1R4GMX3 469 aa17.32■□□□□ 0.36
SDR39U1-220ENST00000556548 ZNF860A6NHJ4 632 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 METTL12A8MUP2 240 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 H3BNH8 94 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 MITFO75030 526 aaPredicted RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 CD27P26842 260 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 NTSP30990 170 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 PIGAP37287 484 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 LSAMPQ13449 338 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 GPR19Q15760 415 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 ZNF630Q2M218 657 aaPredicted RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 GPR153Q6NV75 609 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 SLC38A5Q8WUX1 472 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 GAL3ST3Q96A11 431 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 MBOAT4Q96T53 435 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 SERHL2Q9H4I8 314 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 ACSS1Q9NUB1 689 aaPredicted RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 MRPS2Q9Y399 296 aaKnown RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 SAMHD1Q9Y3Z3 626 aaKnown RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 OR5K4A6NMS3 321 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 NME6O75414 186 aaPredicted RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 TFAP2AP05549 437 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 POLR2IP36954 125 aaKnown RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 TGM3Q08188 693 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 SHQ1Q6PI26 577 aaKnown RBP17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 OLIG3Q7RTU3 272 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 HIPK1Q86Z02 1210 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 ARL10Q8N8L6 244 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 TSPAN14Q8NG11 270 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 LMX1AQ8TE12 382 aa17.31■□□□□ 0.36
SDR39U1-220ENST00000556548 AMBRA1Q9C0C7 1298 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms