RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PIK3CBP42338 1070 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 IGLV3-21P80748 117 aaPredicted RBP20.92■□□□□ 0.94
ACTN1-220ENST00000556433 SLC7A5Q01650 507 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 BIKQ13323 160 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 SETDB1Q15047 1291 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 LIPJQ5W064 366 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 GK5Q6ZS86 529 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 SLC22A16Q86VW1 577 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 MARVELD2Q8N4S9 558 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 TANKQ92844 425 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 SPOCK3Q9BQ16 436 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 FAM173AQ9BQD7 235 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 TTTY12Q9BZ98 90 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 TP63Q9H3D4 680 aaPredicted RBP20.92■□□□□ 0.94
ACTN1-220ENST00000556433 DMRT3Q9NQL9 472 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 PCDHGA11Q9Y5H2 935 aa20.92■□□□□ 0.94
ACTN1-220ENST00000556433 ESYT3A0FGR9 886 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 HMX2A2RU54 273 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 LRRC14BA6NHZ5 514 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 PLPP1O14494 284 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 DYRK3O43781 588 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 PTX3P26022 381 aaPredicted RBP20.91■□□□□ 0.94
ACTN1-220ENST00000556433 SSTR2P30874 369 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 TLX1P31314 330 aaPredicted RBP20.91■□□□□ 0.94
ACTN1-220ENST00000556433 RPS13P62277 151 aaKnown RBP20.91■□□□□ 0.94
ACTN1-220ENST00000556433 ASPHQ12797 758 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 ACAP2Q15057 778 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 UAP1Q16222 522 aaPredicted RBP20.91■□□□□ 0.94
ACTN1-220ENST00000556433 MPEG1Q2M385 716 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 PIGGQ5H8A4 983 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 NDUFAF5Q5TEU4 345 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 C18orf63Q68DL7 685 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 GOLM1Q8NBJ4 401 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 ZDHHC11Q9H8X9 412 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 SNX15Q9NRS6 342 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 SACM1LQ9NTJ5 587 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 PHF11Q9UIL8 331 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 TSC22D4Q9Y3Q8 395 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 ATG4BQ9Y4P1 393 aa20.91■□□□□ 0.94
ACTN1-220ENST00000556433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.91■□□□□ 0.94
ACTN1-220ENST00000556433 ZNF407Q9C0G0 2248 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 A0A096LPK6 155 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 CCDC189A1A4V9 331 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 NPIPA2E9PIF3 369 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 NPIPA3F8WFD2 350 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 GLSO94925 669 aaPredicted RBP20.9■□□□□ 0.94
ACTN1-220ENST00000556433 P04436 131 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 ALDH18A1P54886 795 aaKnown RBP20.9■□□□□ 0.94
ACTN1-220ENST00000556433 PHEXP78562 749 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 TNFRSF17Q02223 184 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 FOLH1Q04609 750 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 GXYLT1Q4G148 440 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 EMC4Q5J8M3 183 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 DGAT2L6Q6ZPD8 337 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 FAM47EQ6ZV65 393 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 ZNF572Q7Z3I7 529 aaPredicted RBP20.9■□□□□ 0.94
ACTN1-220ENST00000556433 ZCCHC7Q8N3Z6 543 aaKnown RBP20.9■□□□□ 0.94
ACTN1-220ENST00000556433 DOK4Q8TEW6 326 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 ASB5Q8WWX0 329 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 RND1Q92730 232 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 REPS1Q96D71 796 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 ENKD1Q9H0I2 346 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 IL1RL2Q9HB29 575 aa20.9■□□□□ 0.94
ACTN1-220ENST00000556433 H0YIV9 168 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 KLK8O60259 260 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 PRKRAO75569 313 aaKnown RBP20.89■□□□□ 0.93
ACTN1-220ENST00000556433 KLHL2O95198 593 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 IGKV3-11P04433 115 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 ALOX15P16050 662 aaPredicted RBP20.89■□□□□ 0.93
ACTN1-220ENST00000556433 TYK2P29597 1187 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 DNASE1L1P49184 302 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 HNRNPH2P55795 449 aaKnown RBP20.89■□□□□ 0.93
ACTN1-220ENST00000556433 GTF2H2Q13888 395 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 PCBP2Q15366 365 aaKnown RBP eCLIP20.89■□□□□ 0.932e-6■■■□□ 15.9
ACTN1-220ENST00000556433 CPSF6Q16630 551 aaKnown RBP eCLIP20.89■□□□□ 0.93
ACTN1-220ENST00000556433 GTF2H2CQ6P1K8 395 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 KLC3Q6P597 504 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 MEX3BQ6ZN04 569 aaKnown RBP20.89■□□□□ 0.93
ACTN1-220ENST00000556433 TMEM251Q8N6I4 163 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 NUBPLQ8TB37 319 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 ART5Q96L15 291 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 LRRC1Q9BTT6 524 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 IPPKQ9H8X2 491 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 CPSF2Q9P2I0 782 aaKnown RBP20.89■□□□□ 0.93
ACTN1-220ENST00000556433 RNF6Q9Y252 685 aa20.89■□□□□ 0.93
ACTN1-220ENST00000556433 FBN2P35556 2912 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 DNAJC13O75165 2243 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 HRKO00198 91 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 PROM1O43490 865 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 CCL3P10147 92 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 BUD31P41223 144 aaPredicted RBP20.88■□□□□ 0.93
ACTN1-220ENST00000556433 MAGEA5P43359 124 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 ARFIP1P53367 373 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 PLIN5Q00G26 463 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 PMPCAQ10713 525 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 C8orf74Q6P047 294 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 GOLGA7Q7Z5G4 137 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 C9orf40Q8IXQ3 194 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 FAM109AQ8N4B1 249 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 RPRMLQ8N4K4 120 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms