RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 JKAMPQ9P055 326 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 SPRR3Q9UBC9 169 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 RUVBL2Q9Y230 463 aaKnown RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 EIF3LQ9Y262 564 aaKnown RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 PPP2R2CQ9Y2T4 447 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 NAALAD2Q9Y3Q0 740 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 SLC22A7Q9Y694 548 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 SCN3AQ9NY46 2000 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 hCG_1818297A0A087WSY0 165 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 TCRBV16S1A1N1A0A5B0 115 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ZNF839A8K0R7 811 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 A8MUA0 341 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 KDM4EB2RXH2 506 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 G3V3Y1 287 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 KPNA5O15131 536 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 CHST10O43529 356 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 B4GALT2O60909 372 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ZFAND5O76080 213 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 OR6B1O95007 311 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 MATN4O95460 622 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 JAK1P23458 1154 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 HRH2P25021 359 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 CYLC1P35663 651 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PTH2RP49190 550 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 AGFG1P52594 562 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PNLIPRP1P54315 467 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 RPS15AP62244 130 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 BTG2P78543 158 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ZBED6P86452 979 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PLP2Q04941 152 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 CAPRIN1Q14444 709 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 SEMA3AQ14563 771 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ZNF750Q32MQ0 723 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 KRTAP24-1Q3LI83 254 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 SPATS1Q496A3 300 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ACSF3Q4G176 576 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PTRHD1Q6GMV3 140 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 AFTPHQ6ULP2 937 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 QSOX2Q6ZRP7 698 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ZNF534Q76KX8 674 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 OTOAQ7RTW8 1153 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 CCDC50Q8IVM0 306 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 AFAP1L2Q8N4X5 818 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 B3GNT7Q8NFL0 401 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ZCCHC10Q8TBK6 192 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 SLC13A3Q8WWT9 602 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 SREK1Q8WXA9 508 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ASB15Q8WXK1 588 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 TM4SF19Q96DZ7 209 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 TSPAN17Q96FV3 270 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PKP4Q99569 1192 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 TMEM184CQ9NVA4 438 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PIH1D1Q9NWS0 290 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 ZNF223Q9UK11 482 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 PPIEQ9UNP9 301 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 R3HDM2Q9Y2K5 976 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.3□□□□□ -1.4
ATXN3-236ENST00000556220 MGAM2Q2M2H8 2515 aa6.3□□□□□ -1.4
ATXN3-236ENST00000556220 IGKV3D-11A0A0A0MRZ8 115 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 ZNF860A6NHJ4 632 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 EEF1E1-BLOC1S5C9J1V9 151 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 E7ENX8 843 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 APOC4-APOC2K7ER74 178 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 EEF1E1O43324 174 aaKnown RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 TLX2O43763 284 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 PRKNO60260 465 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 LCMT2O60294 686 aaKnown RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 PPM1BO75688 479 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 OR2J2O76002 312 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 STK10O94804 968 aaKnown RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 MYO1DO94832 1006 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SOX30O94993 753 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 IL18BPO95998 194 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 APOC2P02655 101 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 PAX1P15863 534 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 COMTP21964 271 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 CTSSP25774 331 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 OPRM1P35372 400 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SOX3P41225 446 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 GPR143P51810 404 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 WNT3P56703 355 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 TAP2Q03519 686 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 TNK1Q13470 666 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 HERC3Q15034 1050 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SIX1Q15475 284 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 TERF2Q15554 542 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 PARP6Q2NL67 630 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 CHRFAM7AQ494W8 412 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 FASTKD1Q53R41 847 aaKnown RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 C10orf62Q5T681 223 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 RTL4Q6ZR62 310 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 BBS12Q6ZW61 710 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 ASPGQ86U10 573 aa6.29□□□□□ -1.4
ATXN3-236ENST00000556220 LDB1Q86U70 411 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-236ENST00000556220 SLC26A11Q86WA9 606 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms