RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 IL1RL2Q9HB29 575 aa18.26■□□□□ 0.51
PRKCH-219ENST00000555906 SACM1LQ9NTJ5 587 aa18.26■□□□□ 0.51
PRKCH-219ENST00000555906 RNF6Q9Y252 685 aa18.26■□□□□ 0.51
PRKCH-219ENST00000555906 TSC22D4Q9Y3Q8 395 aa18.26■□□□□ 0.51
PRKCH-219ENST00000555906 SYCE1LA8MT33 242 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 G3V3Y1 287 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 ZNF354AO60765 605 aaPredicted RBP18.25■□□□□ 0.51
PRKCH-219ENST00000555906 IGKV3-11P04433 115 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 CAPN3P20807 821 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 CNR1P21554 472 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 PIK3CBP42338 1070 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 MAGEA4P43358 317 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 NR0B1P51843 470 aaKnown RBP18.25■□□□□ 0.51
PRKCH-219ENST00000555906 ARFIP1P53367 373 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 PLIN5Q00G26 463 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 BIKQ13323 160 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 HYAL4Q2M3T9 481 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 ZNF750Q32MQ0 723 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 OR4C11Q6IEV9 310 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 ZDHHC24Q6UX98 284 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 CENPLQ8N0S6 344 aaPredicted RBP18.25■□□□□ 0.51
PRKCH-219ENST00000555906 ZCCHC7Q8N3Z6 543 aaKnown RBP18.25■□□□□ 0.51
PRKCH-219ENST00000555906 RPRMLQ8N4K4 120 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 HUS1BQ8NHY5 278 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 RHEBL1Q8TAI7 183 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 SREK1Q8WXA9 508 aaKnown RBP18.25■□□□□ 0.51
PRKCH-219ENST00000555906 ART5Q96L15 291 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 CENPKQ9BS16 269 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 DMRT3Q9NQL9 472 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 PHF11Q9UIL8 331 aa18.25■□□□□ 0.51
PRKCH-219ENST00000555906 A0A087X1B8 175 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 SAP18O00422 153 aaKnown RBP18.24■□□□□ 0.51
PRKCH-219ENST00000555906 PLPP1O14494 284 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 BCKDKO14874 412 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 DYRK3O43781 588 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 SH3BGRLO75368 114 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 P04436 131 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 MTHFD2P13995 350 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 RAP1GDS1P52306 607 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 TLE4Q04727 773 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 TFF3Q07654 80 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 SLAMF1Q13291 335 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 DDX39BQ13838 428 aaKnown RBP18.24■□□□□ 0.51
PRKCH-219ENST00000555906 SETDB1Q15047 1291 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 FAM47EQ6ZV65 393 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 ACAD11Q709F0 780 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 C9orf40Q8IXQ3 194 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 TMEM251Q8N6I4 163 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 LILRB4Q8NHJ6 448 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 SLC22A8Q8TCC7 542 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 RGMAQ96B86 450 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 FBXL20Q96IG2 436 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 SMC6Q96SB8 1091 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 SORBS1Q9BX66 1292 aaKnown RBP18.24■□□□□ 0.51
PRKCH-219ENST00000555906 OR51B5Q9H339 312 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 RPF2Q9H7B2 306 aaKnown RBP18.24■□□□□ 0.51
PRKCH-219ENST00000555906 MCCC2Q9HCC0 563 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 NPDC1Q9NQX5 325 aaPredicted RBP18.24■□□□□ 0.51
PRKCH-219ENST00000555906 RYDENQ9NUL5 291 aaKnown RBP18.24■□□□□ 0.51
PRKCH-219ENST00000555906 ACOT9Q9Y305 439 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 ATG4BQ9Y4P1 393 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 LIPGQ9Y5X9 500 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 HIVEP1P15822 2718 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 ARHGAP21Q5T5U3 1957 aa18.24■□□□□ 0.51
PRKCH-219ENST00000555906 NCKAP5O14513 1909 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 EXPH5Q8NEV8 1989 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 A0A1B0GVC2 190 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 FIGNL2A6NMB9 653 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 FAM90A27PA6NNH2 459 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 NPIPA2E9PIF3 369 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 NPIPA3F8WFD2 350 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 UGDHO60701 494 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 CCL3P10147 92 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 MAGEA5P43359 124 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 NUP107P57740 925 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 KRTAP10-9P60411 292 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 PHEXP78562 749 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 FOLH1Q04609 750 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 FOXO1Q12778 655 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 SPRED3Q2MJR0 410 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 PIGGQ5H8A4 983 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 LIPJQ5W064 366 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 TRILQ7L0X0 811 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 GPR180Q86V85 440 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 TEX9Q8N6V9 391 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 OR5M3Q8NGP4 307 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 KCTD4Q8WVF5 259 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 TANKQ92844 425 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 NXNL1Q96CM4 212 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 SENP5Q96HI0 755 aaPredicted RBP18.23■□□□□ 0.51
PRKCH-219ENST00000555906 PELOQ9BRX2 385 aaKnown RBP18.23■□□□□ 0.51
PRKCH-219ENST00000555906 SH2D2AQ9NP31 389 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 PNPLA3Q9NST1 481 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.23■□□□□ 0.51
PRKCH-219ENST00000555906 PCDHGA11Q9Y5H2 935 aa18.23■□□□□ 0.51
PRKCH-219ENST00000555906 FOXO6A8MYZ6 492 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 H0YIV9 168 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 AQP7O14520 342 aa18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ALOX15P16050 662 aaPredicted RBP18.22■□□□□ 0.51
PRKCH-219ENST00000555906 ACVR2AP27037 513 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms