RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 CFC1P0CG37 223 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 MYOGP15173 224 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 AOC1P19801 751 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 RPA1P27694 616 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 CD86P42081 329 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 TNFRSF4P43489 277 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 FHITP49789 147 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 MFGE8Q08431 387 aaPredicted RBP4.55□□□□□ -1.68
VRK1-205ENST00000555402 HSPA14Q0VDF9 509 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 BTG3Q14201 252 aaPredicted RBP4.55□□□□□ -1.68
VRK1-205ENST00000555402 MEF2DQ14814 521 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 TMEM30BQ3MIR4 351 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 HERC4Q5GLZ8 1057 aaPredicted RBP4.55□□□□□ -1.68
VRK1-205ENST00000555402 HIST2H2AA3Q6FI13 130 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 LCLAT1Q6UWP7 414 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 KIF6Q6ZMV9 814 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 CATSPER4Q7RTX7 472 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 BNIPLQ7Z465 357 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 ERC1Q8IUD2 1116 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 TCP11Q8WWU5 503 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 LIPHQ8WWY8 451 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 TAF4BQ92750 862 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 CNRIP1Q96F85 164 aaPredicted RBP4.55□□□□□ -1.68
VRK1-205ENST00000555402 SAMD8Q96LT4 415 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 BARHL1Q9BZE3 327 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 RAB17Q9H0T7 212 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 SIRPDQ9H106 197 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 PLEKHA3Q9HB20 300 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 SCRT2Q9NQ03 307 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 HPS4Q9NQG7 708 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 HPF1Q9NWY4 346 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 CLIP2Q9UDT6 1046 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 CLCA3PQ9Y6N3 262 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 A0A0U1RRA0 63 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 SH3PXD2BA1X283 911 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 TLX2O43763 284 aaPredicted RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 ANXA9O76027 345 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 DUS4LO95620 317 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 CXCL10P02778 98 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 HIST1H2AGP0C0S8 130 aaPredicted RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 GNSP15586 552 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 GLRA1P23415 457 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 AKT2P31751 481 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 ASMTP46597 345 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 CAMLGP49069 296 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 LIMK2P53671 638 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 SLC26A5P58743 744 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 NLRP11P59045 1033 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 POLR2FP61218 127 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 EXOSC7Q15024 291 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 EPC2Q52LR7 807 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 DDI2Q5TDH0 399 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 CDC42EP5Q6NZY7 148 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 FRRS1Q6ZNA5 592 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 ADCK1Q86TW2 530 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 WDR49Q8IV35 697 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 PARP8Q8N3A8 854 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 OR52B6Q8NGF0 335 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 HIST1H2ACQ93077 130 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 MRPL24Q96A35 216 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 ART5Q96L15 291 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 TAAR6Q96RI8 345 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 KCNK16Q96T55 309 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 RBM4Q9BWF3 364 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 PINK1Q9BXM7 581 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 ATG10Q9H0Y0 220 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 TECRQ9NZ01 308 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 DIMT1Q9UNQ2 313 aaKnown RBP4.54□□□□□ -1.68
VRK1-205ENST00000555402 WIPI2Q9Y4P8 454 aa4.54□□□□□ -1.68
VRK1-205ENST00000555402 KIF7Q2M1P5 1343 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 A0A087X002 238 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.53□□□□□ -1.68
VRK1-205ENST00000555402 TNFSF12O43508 249 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 LRP3O75074 770 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 ZNF821O75541 412 aaPredicted RBP4.53□□□□□ -1.68
VRK1-205ENST00000555402 MBL2P11226 248 aaPredicted RBP4.53□□□□□ -1.68
VRK1-205ENST00000555402 FCARP24071 287 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 PRDX6P30041 224 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 CHRNA3P32297 505 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 RPL9P32969 192 aaKnown RBP4.53□□□□□ -1.68
VRK1-205ENST00000555402 CCL11P51671 97 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 PEX3P56589 373 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 ERVK-16P61578 105 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 ZNF177Q13360 481 aaPredicted RBP4.53□□□□□ -1.68
VRK1-205ENST00000555402 INAQ16352 499 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 C1orf189Q5VU69 101 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 LIPJQ5W064 366 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 RAET1GQ6H3X3 334 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 IRGCQ6NXR0 463 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 LRRC17Q8N6Y2 441 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 ADAD2Q8NCV1 583 aaKnown RBP4.53□□□□□ -1.68
VRK1-205ENST00000555402 GOLGA5Q8TBA6 731 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 RSPH1Q8WYR4 309 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 RAB40CQ96S21 281 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 ASCL2Q99929 193 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 OVOL2Q9BRP0 275 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 FTHL17Q9BXU8 183 aa4.53□□□□□ -1.68
VRK1-205ENST00000555402 RWDD1Q9H446 243 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms