RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 RAB39AQ14964 217 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 NKG7Q16617 165 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 PGS1Q32NB8 556 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 C2orf73Q8N5S3 287 aaPredicted RBP16.5■□□□□ 0.23
SHOX-204ENST00000554971 FAM86B1Q8N7N1 296 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 CLHC1Q8NHS4 586 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 FLVCR1-AS1Q8TAF5 88 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 ZNF480Q8WV37 535 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 PHF12Q96QT6 1004 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 GFM1Q96RP9 751 aaKnown RBP16.5■□□□□ 0.23
SHOX-204ENST00000554971 GABARAPL1Q9H0R8 117 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 SYNDIG1Q9H7V2 258 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 HRASLS2Q9NWW9 162 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 HSPE1-MOB4S4R3N1 261 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 NOL3O60936 208 aaKnown RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 ABCB7O75027 752 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 POLR2CP19387 275 aaPredicted RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 IMPA1P29218 277 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 E2F1Q01094 437 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 VEZF1Q14119 521 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 SPIDRQ14159 915 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 HES3Q5TGS1 186 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 CPZQ66K79 652 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 SHQ1Q6PI26 577 aaKnown RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 WDR74Q6RFH5 385 aaPredicted RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 CAMKMTQ7Z624 323 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 THOC6Q86W42 341 aaKnown RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 MARCH9Q86YJ5 346 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 SLITRK4Q8IW52 837 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 LRRC56Q8IYG6 542 aaPredicted RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 VPS37AQ8NEZ2 397 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 ADAMTS14Q8WXS8 1223 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 C12orf43Q96C57 262 aaKnown RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 AHCYL2Q96HN2 611 aaKnown RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 OR6C2Q9NZP2 312 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 LOC400499M0QZD8 3231 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 MN1Q10571 1320 aaPredicted RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 A0A1W2PPV9 198 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 FAM221BA6H8Z2 402 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 CAPN5O15484 640 aaPredicted RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 CRHBPP24387 322 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 TACR1P25103 407 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 GSTM2P28161 218 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 SHMT2P34897 504 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 HPCAP84074 193 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 VAC14Q08AM6 782 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 GTDC1Q4AE62 458 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 C6orf141Q5SZD1 244 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 DNAJC14Q6Y2X3 702 aaPredicted RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 OR13F1Q8NGS4 319 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 OR56A3Q8NH54 315 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 REPS1Q96D71 796 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 C11orf24Q96F05 449 aaPredicted RBP16.49■□□□□ 0.23
SHOX-204ENST00000554971 SEMA6CQ9H3T2 930 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 IL1RAPQ9NPH3 570 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 ETAA1Q9NY74 926 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 BTNL2Q9UIR0 455 aa16.49■□□□□ 0.23
SHOX-204ENST00000554971 ANKRD11Q6UB99 2663 aaPredicted RBP16.48■□□□□ 0.23
SHOX-204ENST00000554971 PRAMEF4O60810 478 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 UGT2B11O75310 529 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 E2F6O75461 281 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 SEC14L2O76054 403 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 C9P02748 559 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 CHRM5P08912 532 aaPredicted RBP16.48■□□□□ 0.23
SHOX-204ENST00000554971 ITGAMP11215 1152 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 TAP2Q03519 686 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 CYP2A13Q16696 494 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 ZIK1Q3SY52 487 aaPredicted RBP16.48■□□□□ 0.23
SHOX-204ENST00000554971 XKR6Q5GH73 641 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 ANXA8L1Q5VT79 327 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 PRAMEF9Q5VWM5 478 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 SETD9Q8NE22 299 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 OR2L8Q8NGY9 312 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 PYCR2Q96C36 320 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 PANX1Q96RD7 426 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 MBOAT4Q96T53 435 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 INPP5KQ9BT40 448 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 RAB33BQ9H082 229 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 SLC6A13Q9NSD5 602 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 SIRT5Q9NXA8 310 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 STOX2Q9P2F5 926 aaPredicted RBP16.48■□□□□ 0.23
SHOX-204ENST00000554971 EPHA6Q9UF33 1036 aa16.48■□□□□ 0.23
SHOX-204ENST00000554971 TPRP12270 2363 aaKnown RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 IGHV5-10-1A0A0J9YXX1 117 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 CLIC1O00299 241 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 PRICKLE3O43900 615 aaPredicted RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 SCN2BO60939 215 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 ABCB1P08183 1280 aaPredicted RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 LSSP48449 732 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 TPD52P55327 224 aaPredicted RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 ZFP36L1Q07352 338 aaKnown RBP16.47■□□□□ 0.23
SHOX-204ENST00000554971 ACSM2AQ08AH3 577 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 VMACQ2NL98 169 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 ACSM2BQ68CK6 577 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 TMEM71Q6P5X7 295 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 AGTRAPQ6RW13 159 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 SPESP1Q6UW49 350 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 OOSP2Q86WS3 158 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 RCBTB1Q8NDN9 531 aa16.47■□□□□ 0.23
SHOX-204ENST00000554971 OR4D9Q8NGE8 314 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms