RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NKAIN2Q5VXU1 208 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 LIPJQ5W064 366 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 RTL6Q6ICC9 239 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TRIM65Q6PJ69 517 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ZER1Q7Z7L7 766 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 KDM8Q8N371 416 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 PARP8Q8N3A8 854 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 HDDC3Q8N4P3 179 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 LEMD2Q8NC56 503 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 OR5T2Q8NGG2 359 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 OR5M9Q8NGP3 310 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 RSPH1Q8WYR4 309 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 SLCO2A1Q92959 643 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TMEM186Q96B77 213 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 RAB39BQ96DA2 213 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ATXN7L3BQ96GX2 97 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 RPGRIP1Q96KN7 1286 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 LINC00479Q96M42 142 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TAAR6Q96RI8 345 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 S1PR3Q99500 378 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 GANQ9H2C0 597 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 VIPAS39Q9H9C1 493 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 GDF3Q9NR23 364 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ACOXLQ9NUZ1 547 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 NLGN3Q9NZ94 848 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ACTR3BQ9P1U1 418 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 KLK11Q9UBX7 282 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ASIC3Q9UHC3 531 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 TEKT2Q9UIF3 430 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 DIMT1Q9UNQ2 313 aaKnown RBP2.62□□□□□ -1.99
SCFD1-213ENST00000554776 PLA2G4CQ9UP65 541 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 EXOGQ9Y2C4 368 aaKnown RBP2.62□□□□□ -1.99
SCFD1-213ENST00000554776 MTF2Q9Y483 593 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-213ENST00000554776 ATP8B3O60423 1300 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 RNF123Q5XPI4 1314 aa2.62□□□□□ -1.99
SCFD1-213ENST00000554776 NPC1L1Q9UHC9 1359 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CACNA1FO60840 1977 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 RAD54L2Q9Y4B4 1467 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 OR5H15A6NDH6 313 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 TXNL1O43396 289 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 OR6A2O95222 327 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 SYNGR4O95473 234 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 FGF19O95750 216 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 PDGFBP01127 241 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CT45A8P0DMV1 189 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CT45A9P0DMV2 189 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CYP11B1P15538 503 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CD1DP15813 335 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 FUT1P19526 365 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CHRNA3P32297 505 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 ACADSBP45954 432 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 FHITP49789 147 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 GMFBP60983 142 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 RPL27P61353 136 aaKnown RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CCZ1BP86790 482 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CCZ1P86791 482 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 RBBP4Q09028 425 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 GAMTQ14353 236 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 EXOSC7Q15024 291 aaKnown RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 OR1C1Q15619 314 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 MPPE1Q53F39 396 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CT45A2Q5DJT8 189 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 WLSQ5T9L3 541 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 BSPRYQ5W0U4 402 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF772Q68DY9 489 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CDC42EP5Q6NZY7 148 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 NEK5Q6P3R8 708 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 KIF6Q6ZMV9 814 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 Q6ZRG5 221 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 ITIH5Q86UX2 942 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 KCNMB4Q86W47 210 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 OR4N5Q8IXE1 308 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF614Q8N883 585 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 MRPL43Q8N983 215 aaKnown RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 AQP11Q8NBQ7 271 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CNNM3Q8NE01 707 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 NUP37Q8NFH4 326 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 OR52B6Q8NGF0 335 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 OR6M1Q8NGM8 313 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 MRPL38Q96DV4 380 aaKnown RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 COG3Q96JB2 828 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 DEFB118Q96PH6 123 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 USP28Q96RU2 1077 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 KRT12Q99456 494 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 SPAG8Q99932 426 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 OVOL2Q9BRP0 275 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 TRPV6Q9H1D0 765 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 MTHFD2LQ9H903 347 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 SLC25A19Q9HC21 320 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 NGBQ9NPG2 151 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 CNOT2Q9NZN8 540 aaKnown RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 IL20RAQ9UHF4 553 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 MRPS18CQ9Y3D5 142 aaKnown RBP2.61□□□□□ -1.99
SCFD1-213ENST00000554776 MMP24Q9Y5R2 645 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 PRSS21Q9Y6M0 314 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 RNF215Q9Y6U7 377 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 ZHX2Q9Y6X8 837 aa2.61□□□□□ -1.99
SCFD1-213ENST00000554776 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-213ENST00000554776 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
SCFD1-213ENST00000554776 TMCO5BA8MYB1 307 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms