RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SAGE2PA6NJ88 616 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 FAM90A27PA6NNH2 459 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 A8MUA0 341 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 B2RBV5 119 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 KLRC4-KLRK1H3BQV0 150 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 GOLGA8RI6L899 631 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 SLC16A5O15375 505 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 GALR3O60755 368 aaPredicted RBP8.26□□□□□ -1.09
TDP1-208ENST00000553989 PEX11AO75192 247 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 SNNO75324 88 aaPredicted RBP8.26□□□□□ -1.09
TDP1-208ENST00000553989 BANF1O75531 89 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 GUCA1CO95843 209 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 B3GALT4O96024 378 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 C1QAP02745 245 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 SERPINA6P08185 405 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 MYL2P10916 166 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 MAOAP21397 527 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 BGNP21810 368 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 PTGS2P35354 604 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 PGM1P36871 562 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 HK2P52789 917 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 PRKAA2P54646 552 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 MRPS35P82673 323 aaKnown RBP8.26□□□□□ -1.09
TDP1-208ENST00000553989 OCRLQ01968 901 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 HYAL2Q12891 473 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 PWP1Q13610 501 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 BLMHQ13867 455 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 CSHL1Q14406 222 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 PHKG1Q16816 387 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 HSP90AA5PQ58FG0 334 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 SPANXN3Q5MJ09 141 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 METTL21CQ5VZV1 264 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 NET1Q7Z628 596 aaPredicted RBP8.26□□□□□ -1.09
TDP1-208ENST00000553989 LCA5Q86VQ0 697 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 DOLPP1Q86YN1 238 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 TMEM156Q8N614 296 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 POGLUT1Q8NBL1 392 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 RFWD2Q8NHY2 731 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 PPP1R14CQ8TAE6 165 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 ELP5Q8TE02 316 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 OLFM1Q99784 485 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 SPOCK3Q9BQ16 436 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 WDR83Q9BRX9 315 aaKnown RBP8.26□□□□□ -1.09
TDP1-208ENST00000553989 SGPP1Q9BX95 441 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 CADM1Q9BY67 442 aaKnown RBP8.26□□□□□ -1.09
TDP1-208ENST00000553989 VCXQ9H320 206 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 DENND2DQ9H6A0 471 aaPredicted RBP8.26□□□□□ -1.09
TDP1-208ENST00000553989 MCCC2Q9HCC0 563 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 LANCL2Q9NS86 450 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 ARL8BQ9NVJ2 186 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 TAS2R1Q9NYW7 299 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 TXNDC16Q9P2K2 825 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 EGFL7Q9UHF1 273 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 TAGLN3Q9UI15 199 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 FBXW2Q9UKT8 454 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 DYRK1BQ9Y463 629 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 PCNX1Q96RV3 2341 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 OTOGQ6ZRI0 2925 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 NCOA6Q14686 2063 aaPredicted RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 TRBV11-1A0A0K0K1C0 115 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 TRBC2A0A5B9 178 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 CDK2AP1O14519 115 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 HS6ST1O60243 411 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 GLRA3O75311 464 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 FKBP6O75344 327 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 H2AFYO75367 372 aaKnown RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 SNUPNO95149 360 aaKnown RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 RNH1P13489 461 aaKnown RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 NPPBP16860 134 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 PGAM1P18669 254 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 SERPINB3P29508 390 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 SPRP35270 261 aaPredicted RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 HLCSP50747 726 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 CLCN2P51788 898 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 MLF1P58340 268 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 GPR85P60893 370 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 RAB8AP61006 207 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 BTG2P78543 158 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 BST1Q10588 318 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 EFTUD2Q15029 972 aaKnown RBP eCLIP8.25□□□□□ -1.09
TDP1-208ENST00000553989 RBBP5Q15291 538 aaKnown RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 TRMT5Q32P41 509 aaKnown RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 CCDC153Q494R4 210 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 RNFT1Q5M7Z0 435 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 TMEM211Q6ICI0 200 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 AAGABQ6PD74 315 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 PAQR3Q6TCH7 311 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 DNAJC14Q6Y2X3 702 aaPredicted RBP8.25□□□□□ -1.09
TDP1-208ENST00000553989 QSOX2Q6ZRP7 698 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 TMPRSS11BQ86T26 416 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 TMEM200AQ86VY9 491 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 CYP4Z2PQ8N1L4 340 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 FAM57AQ8TBR7 257 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 ASB5Q8WWX0 329 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 SLC5A11Q8WWX8 675 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 ATL1Q8WXF7 558 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 DNAJC9Q8WXX5 260 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 TSNARE1Q96NA8 513 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 NSMCE4AQ9NXX6 385 aa8.25□□□□□ -1.09
TDP1-208ENST00000553989 STX18Q9P2W9 335 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms