RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 STX4Q12846 297 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 UGT8Q16880 541 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 FAAH2Q6GMR7 532 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 TMEM205Q6UW68 189 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 CPLX4Q7Z7G2 160 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 TICAM1Q8IUC6 712 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 OR4N5Q8IXE1 308 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 FAM9CQ8IZT9 166 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 METTL21AQ8WXB1 218 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 MARK4Q96L34 752 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 RILPQ96NA2 401 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 ELAC2Q9BQ52 826 aaKnown RBP11.49□□□□□ -0.57
SHMT2-209ENST00000553949 EPN3Q9H201 632 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 REEP4Q9H6H4 257 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 MIEF1Q9NQG6 463 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 EHD3Q9NZN3 535 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 G3BP2Q9UN86 482 aaKnown RBP11.49□□□□□ -0.57
SHMT2-209ENST00000553949 GPR45Q9Y5Y3 372 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 HS3ST3B1Q9Y662 390 aa11.49□□□□□ -0.57
SHMT2-209ENST00000553949 TCRBV16S1A1N1A0A5B0 115 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 SRRM3A6NNA2 597 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-209ENST00000553949 ZNF891A8MT65 544 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-209ENST00000553949 PCDH17O14917 1159 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 ANKRD28O15084 1053 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 SCAMP2O15127 329 aaKnown RBP11.48□□□□□ -0.57
SHMT2-209ENST00000553949 NKX2-8O15522 239 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 FURINP09958 794 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 PCSK2P16519 638 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 PRPS1L1P21108 318 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 PIK3R1P27986 724 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 HPCAL1P37235 193 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 C21orf58P58505 322 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 IGLV3-21P80748 117 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-209ENST00000553949 TLE3Q04726 772 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 SERTAD2Q14140 314 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 RPS6KA2Q15349 733 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 GSTA3Q16772 222 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 PRSS53Q2L4Q9 553 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 ANKRD26P1Q6NSI1 321 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 LRRC69Q6ZNQ3 347 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 LANCL3Q6ZV70 420 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 ANKRD37Q7Z713 158 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 RAB43Q86YS6 212 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 RIMKLAQ8IXN7 391 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 KRTCAP2Q8N6L1 136 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 OR4K14Q8NGD5 310 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 ADAMTS17Q8TE56 1095 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 C10orf82Q8WW14 230 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 EXOSC8Q96B26 276 aaKnown RBP11.48□□□□□ -0.57
SHMT2-209ENST00000553949 NACC2Q96BF6 587 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 PPCDCQ96CD2 204 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 KLHL29Q96CT2 875 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 CATSPER2Q96P56 530 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 MESP1Q9BRJ9 268 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 ALOXE3Q9BYJ1 711 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 DPY30Q9C005 99 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 BRINP2Q9C0B6 783 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 RABEP2Q9H5N1 569 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 C19orf25Q9UFG5 118 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-209ENST00000553949 UTS2RQ9UKP6 389 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 PSME2Q9UL46 239 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
SHMT2-209ENST00000553949 APC2O95996 2303 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 A0A087WV48 116 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 LOC102723996A0A087X1L8 192 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 MYOCOSA0A1B0GUC4 107 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 A0A1W2PS29 197 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 CDC14CA4D256 554 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 SYNDIG1LA6NDD5 238 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 GABRR3A8MPY1 467 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 SOCS6O14544 535 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 TBX19O60806 448 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 ERAL1O75616 437 aaKnown RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 CSNK2A2P19784 350 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 RPL3P39023 403 aaKnown RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 XKP51811 444 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 NME5P56597 212 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 UFM1P61960 85 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 EEF1A2Q05639 463 aaKnown RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 BIKQ13323 160 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 PDE7AQ13946 482 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 CRTC2Q53ET0 693 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 BROXQ5VW32 411 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 METTL21CQ5VZV1 264 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 FAM180BQ6P0A1 224 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 KIRREL2Q6UWL6 708 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 R3HCC1LQ7Z5L2 792 aaKnown RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 CPEB2Q7Z5Q1 589 aaKnown RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 MTERF4Q7Z6M4 381 aaKnown RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 MRGPREQ86SM8 312 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 MIER2Q8N344 545 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 C7orf57Q8NEG2 295 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 C8orf44Q96CB5 159 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 MTERF3Q96E29 417 aa11.47□□□□□ -0.57
SHMT2-209ENST00000553949 CNRIP1Q96F85 164 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-209ENST00000553949 ZNF764Q96H86 408 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms