RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 RAB38P57729 211 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 SKP1P63208 163 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 CFHR1Q03591 330 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 RBBP4Q09028 425 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 SQSTM1Q13501 440 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 TRIP10Q15642 601 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 INAVAQ3KP66 663 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 SPDYE7PQ495Y7 208 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 COX20Q5RI15 118 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 GARNL3Q5VVW2 1013 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 TMEM64Q6YI46 380 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 ERMP1Q7Z2K6 904 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 RNF130Q86XS8 419 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 KMT5CQ86Y97 462 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 EID3Q8N140 333 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 C11orf65Q8NCR3 313 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 SUN3Q8TAQ9 357 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 NETO1Q8TDF5 533 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 LRTOMTQ8WZ04 291 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 CNRIP1Q96F85 164 aaPredicted RBP11.98□□□□□ -0.49
CACNB3-223ENST00000552480 ZNF681Q96N22 645 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 CSF3RQ99062 836 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 DPH2Q9BQC3 489 aaPredicted RBP11.98□□□□□ -0.49
CACNB3-223ENST00000552480 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
CACNB3-223ENST00000552480 UGT2B28Q9BY64 529 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 TMEM38AQ9H6F2 299 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 ENAMQ9NRM1 1142 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 SEMA3GQ9NS98 782 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 DCAF13Q9NV06 445 aaKnown RBP11.98□□□□□ -0.49
CACNB3-223ENST00000552480 FAF1Q9UNN5 650 aaPredicted RBP11.98□□□□□ -0.49
CACNB3-223ENST00000552480 AURKCQ9UQB9 309 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 C15orf41Q9Y2V0 281 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 ZNF780BQ9Y6R6 833 aa11.98□□□□□ -0.49
CACNB3-223ENST00000552480 WASHC1A8K0Z3 465 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 PEX1O43933 1283 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 DNAJB6O75190 326 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 RDH16O75452 317 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 TIPRLO75663 272 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 SERPINA1P01009 418 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 NUDT7P0C024 238 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 RAP2AP10114 183 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 BMP2P12643 396 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 ETFAP13804 333 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 PEX2P28328 305 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 MPIP34949 423 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 MAGEA8P43361 318 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 CCT3P49368 545 aaKnown RBP11.97□□□□□ -0.49
CACNB3-223ENST00000552480 ARL4DP49703 201 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 EMP3P54852 163 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 OLR1P78380 273 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 HSD11B2P80365 405 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 DUSP2Q05923 314 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 FAM53BQ14153 422 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 FAM98BQ52LJ0 330 aaKnown RBP11.97□□□□□ -0.49
CACNB3-223ENST00000552480 GUSBP11Q6P575 273 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 C6orf120Q7Z4R8 191 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 SLC30A8Q8IWU4 369 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 TTC29Q8NA56 475 aaPredicted RBP11.97□□□□□ -0.49
CACNB3-223ENST00000552480 CATSPER1Q8NEC5 780 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 OR4K14Q8NGD5 310 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 FAM110BQ8TC76 370 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 N4BP2L2Q92802 583 aaPredicted RBP11.97□□□□□ -0.49
CACNB3-223ENST00000552480 NAT6Q93015 286 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 MOAP1Q96BY2 351 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 LOXL4Q96JB6 756 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 SLC41A2Q96JW4 573 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 KLHL4Q9C0H6 718 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 YY1AP1Q9H869 796 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 CLK4Q9HAZ1 481 aaKnown RBP11.97□□□□□ -0.49
CACNB3-223ENST00000552480 TMEM9Q9P0T7 183 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 RAPGEFL1Q9UHV5 662 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 MAP4K5Q9Y4K4 846 aa11.97□□□□□ -0.49
CACNB3-223ENST00000552480 TRIOO75962 3097 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 KMT2EQ8IZD2 1858 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 EME2A4GXA9 379 aaPredicted RBP11.96□□□□□ -0.49
CACNB3-223ENST00000552480 SGK494L7N484 410 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 CYR61O00622 381 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 TOX3O15405 576 aaPredicted RBP11.96□□□□□ -0.49
CACNB3-223ENST00000552480 PCDHGA12O60330 932 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 NSA2O95478 260 aaKnown RBP11.96□□□□□ -0.49
CACNB3-223ENST00000552480 CAPNS1P04632 268 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 C8orf89P0DMQ9 161 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 ARAFP10398 606 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 FASP25445 335 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 KDELR2P33947 212 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 FEN1P39748 380 aaKnown RBP11.96□□□□□ -0.49
CACNB3-223ENST00000552480 PRIM2P49643 509 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 DSTNP60981 165 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 SHC2P98077 582 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 CHRNB3Q05901 458 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 ZNF630Q2M218 657 aaPredicted RBP11.96□□□□□ -0.49
CACNB3-223ENST00000552480 ZNF750Q32MQ0 723 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 PERM1Q5SV97 790 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 TMTC4Q5T4D3 741 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 LPCAT4Q643R3 524 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 HMBOX1Q6NT76 420 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 TMEM71Q6P5X7 295 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 ENPP6Q6UWR7 440 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 USP53Q70EK8 1073 aa11.96□□□□□ -0.49
CACNB3-223ENST00000552480 CCDC116Q8IYX3 515 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms