RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 CNIH4Q9P003 139 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 ZNF629Q9UEG4 869 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 MPDZO75970 2070 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 C15orf38-AP3S2A0A0A6YYH1 394 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 TUBAL3A6NHL2 446 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 AHRRA9YTQ3 701 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 PGRMC1O00264 195 aaKnown RBP13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 ETHE1O95571 254 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 TBX6O95947 436 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 IL2RAP01589 272 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 RFPL3SP0C7P2 107 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 EPXP11678 715 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 ADSLP30566 484 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 STT3AP46977 705 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 TSNQ15631 228 aaKnown RBP13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 C18orf21Q32NC0 220 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 ACSF3Q4G176 576 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 MSS51Q4VC12 460 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 PRAMEF20Q5VT98 475 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 SEM1Q6ZVN7 128 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 TAOK1Q7L7X3 1001 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 VN1R5Q7Z5H4 357 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 IGDCC3Q8IVU1 814 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 PDIK1LQ8N165 341 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 TCAIMQ8N3R3 496 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 FAM13CQ8NE31 585 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 WFDC11Q8NEX6 87 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 HSPBAP1Q96EW2 488 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 VPS39Q96JC1 886 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 CAPZA3Q96KX2 299 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 ART5Q96L15 291 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 JSRP1Q96MG2 331 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 DGAT2Q96PD7 388 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 F2RL3Q96RI0 385 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 TBCDQ9BTW9 1192 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 EFCAB11Q9BUY7 163 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 SLC6A15Q9H2J7 730 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 NEUROD4Q9HD90 331 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 PRDM7Q9NQW5 492 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 DNAJC11Q9NVH1 559 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 ASIC3Q9UHC3 531 aa13.06□□□□□ -0.32
CHMP1A-210ENST00000551981 FAM95CA0A1B0GW59 222 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 NCF1BA6NI72 391 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 LRRC3CA6NJW4 275 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 NCF1CA8MVU1 366 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 DNALI1O14645 258 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 GOSR1O95249 250 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 EPPINO95925 133 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 NCF1P14598 390 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 SERPINB3P29508 390 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 CEACAM8P31997 349 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 TIMP3P35625 211 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 MSH2P43246 934 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 TRPC1P48995 793 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 ID2Q02363 134 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 BIKQ13323 160 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 LAPTM5Q13571 262 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 HIST2H2ACQ16777 129 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 PAGE2BQ5JRK9 111 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 HIST2H2AA3Q6FI13 130 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 ADGRD1Q6QNK2 874 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 C9orf40Q8IXQ3 194 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 PM20D2Q8IYS1 436 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 ACOT4Q8N9L9 421 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 SNX31Q8N9S9 440 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 NAXEQ8NCW5 288 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 TNIP2Q8NFZ5 429 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 PTCD3Q96EY7 689 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 RBM18Q96H35 190 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 SENP5Q96HI0 755 aaPredicted RBP13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 MAPKAP1Q9BPZ7 522 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 WWOXQ9NZC7 414 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 CHMP2BQ9UQN3 213 aa13.05□□□□□ -0.32
CHMP1A-210ENST00000551981 NINQ8N4C6 2090 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 FREM3P0C091 2139 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 JMJD1CQ15652 2540 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 IGKV3-11P04433 115 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 INHBBP09529 407 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 FBXO45P0C2W1 286 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 CPN2P22792 545 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 ATP5A1P25705 553 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 GDF1P27539 372 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 ELK3P41970 407 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 SORDQ00796 357 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 PLIN5Q00G26 463 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 DOC2AQ14183 400 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 ZNF460Q14592 562 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 TGFBIQ15582 683 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 PDK4Q16654 411 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 AP5B1Q2VPB7 878 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 TMEM35AQ53FP2 167 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 TBCELQ5QJ74 424 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 ADNP2Q6IQ32 1131 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 TRMT10BQ6PF06 316 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 CLEC9AQ6UXN8 241 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 Q71RC1 249 aaPredicted RBP13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 SLC29A4Q7RTT9 530 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 OR10G3Q8NGC4 313 aa13.04□□□□□ -0.32
CHMP1A-210ENST00000551981 ANKRD9Q96BM1 317 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms