RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 VCXQ9H320 206 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 ABCG2Q9UNQ0 655 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 SAMD4AQ9UPU9 718 aaKnown RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 RNF215Q9Y6U7 377 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 MYO1GB0I1T2 1018 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 KRT75O95678 551 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 GIMD1P0DJR0 217 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 TDGF1P13385 188 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 ALDH4A1P30038 563 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 GPC1P35052 558 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 CCT3P49368 545 aaKnown RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 RELAQ04206 551 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 FADDQ13158 208 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 TP53BP2Q13625 1128 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 SCARB2Q14108 478 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 SUZ12Q15022 739 aaKnown RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 SHBQ15464 509 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 GPR19Q15760 415 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 OTUD3Q5T2D3 398 aaPredicted RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 TMTC4Q5T4D3 741 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 CEACAM20Q6UY09 585 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 TMEM179BQ7Z7N9 219 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 C19orf47Q8N9M1 422 aaKnown RBP18.6■□□□□ 0.57
SSH1-209ENST00000551165 THAP11Q96EK4 314 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 C10orf90Q96M02 699 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 ZNF681Q96N22 645 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 BDH2Q9BUT1 245 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 NEUROD4Q9HD90 331 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 VNN3Q9NY84 501 aa18.6■□□□□ 0.57
SSH1-209ENST00000551165 MYOCOSA0A1B0GUC4 107 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 hCG_2039718K7EN88 272 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 DEAF1O75398 565 aaPredicted RBP18.59■□□□□ 0.57
SSH1-209ENST00000551165 ALOX12P18054 663 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 SIM1P81133 766 aaPredicted RBP18.59■□□□□ 0.57
SSH1-209ENST00000551165 VLDLRP98155 873 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 CYP27C1Q4G0S4 372 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 C14orf28Q4W4Y0 310 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 MAML2Q8IZL2 1156 aaPredicted RBP18.59■□□□□ 0.57
SSH1-209ENST00000551165 EID3Q8N140 333 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 NATD1Q8N6N6 113 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 PSMA8Q8TAA3 256 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 CNBD2Q96M20 576 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 SERINC2Q96SA4 455 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 MAGIXQ9H6Y5 334 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 ASXL3Q9C0F0 2248 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 ZDBF2Q9HCK1 2354 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 PLOD2O00469 737 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 DENRO43583 198 aaKnown RBP18.59■□□□□ 0.57
SSH1-209ENST00000551165 GUCY1B2O75343 617 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 MED26O95402 600 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 NR2F6P10588 404 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 TNFRSF1BP20333 461 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 CPN2P22792 545 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 CDK6Q00534 326 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 MLC1Q15049 377 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 LTB4RQ15722 352 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 CYBRD1Q53TN4 286 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 MAMSTRQ6ZN01 415 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 EIF3MQ7L2H7 374 aaKnown RBP18.59■□□□□ 0.57
SSH1-209ENST00000551165 ZDHHC21Q8IVQ6 265 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 TGM7Q96PF1 710 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 C9orf16Q9BUW7 83 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 TMEM38AQ9H6F2 299 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 LYARQ9NX58 379 aaKnown RBP18.59■□□□□ 0.57
SSH1-209ENST00000551165 KLHL3Q9UH77 587 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 ZNF639Q9UID6 485 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 RAB26Q9ULW5 256 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 DAPP1Q9UN19 280 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 NAALAD2Q9Y3Q0 740 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 U3KQV3 271 aa18.59■□□□□ 0.57
SSH1-209ENST00000551165 WDR87Q6ZQQ6 2873 aa18.58■□□□□ 0.57
SSH1-209ENST00000551165 RASAL1O95294 804 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 SEMG1P04279 462 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 PRKAG1P54619 331 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 DSTNP60981 165 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 PDK3Q15120 406 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 NHSL2Q5HYW2 709 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 RPS26P11Q5JNZ5 115 aaPredicted RBP18.58■□□□□ 0.56
SSH1-209ENST00000551165 TMEM107Q6UX40 140 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 SLC44A2Q8IWA5 706 aaPredicted RBP18.58■□□□□ 0.56
SSH1-209ENST00000551165 TMEM52Q8NDY8 209 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 OR5D16Q8NGK9 328 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 OR9A2Q8NGT5 310 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 MAGEE2Q8TD90 523 aaPredicted RBP18.58■□□□□ 0.56
SSH1-209ENST00000551165 TAMM41Q96BW9 452 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 CCDC3Q9BQI4 270 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 DNAJB9Q9UBS3 223 aa18.58■□□□□ 0.56
SSH1-209ENST00000551165 LILRA5A6NI73 299 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 B3GALT2O43825 422 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 FKBP9O95302 570 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 NTSP30990 170 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 CTSKP43235 329 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 OR1D5P58170 312 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 TNFRSF17Q02223 184 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 ID2Q02363 134 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 MAPK11Q15759 364 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 LYSMD4Q5XG99 296 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 FKBP9P1Q75LS8 142 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 ABHD13Q7L211 337 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 OLIG3Q7RTU3 272 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms