RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 IFNA16P05015 189 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 LINC00032P0C843 101 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 ITGAMP11215 1152 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 NR1D1P20393 614 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 SLC1A6P48664 564 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 IGLV3-21P80748 117 aaPredicted RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 ID2Q02363 134 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 FOLH1Q04609 750 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 TERF2Q15554 542 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 ELAVL1Q15717 326 aaKnown RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 OR52E8Q6IFG1 317 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 HPS6Q86YV9 775 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 OR4N5Q8IXE1 308 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 AMER2Q8N7J2 671 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 NFAM1Q8NET5 270 aaPredicted RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 DNAJB14Q8TBM8 379 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 TWIST2Q8WVJ9 160 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 PSMF1Q92530 271 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 ILKAPQ9H0C8 392 aaPredicted RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 ZNF395Q9H8N7 513 aaPredicted RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 MMP25Q9NPA2 562 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 PTGDR2Q9Y5Y4 395 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 GNG14A0A1W2PPG7 69 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 WASHC1A8K0Z3 465 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 HMGB1P1B2RPK0 211 aaPredicted RBP18.1■□□□□ 0.49
DDX54-207ENST00000550016 NPIPB8E9PQR5 432 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 SASH3O75995 380 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 MYO1DO94832 1006 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 PRPH2P23942 346 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 TIA1P31483 386 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX54-207ENST00000550016 Q6ZSR9 355 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 DDIASQ8IXT1 998 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 TMEM132CQ8N3T6 1108 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 FAM76AQ8TAV0 307 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 BRIX1Q8TDN6 353 aaKnown RBP18.1■□□□□ 0.49
DDX54-207ENST00000550016 UCN3Q969E3 161 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 FAIM2Q9BWQ8 316 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 KCNK13Q9HB14 408 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 RAP2CQ9Y3L5 183 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 PCDHA9Q9Y5H5 950 aa18.1■□□□□ 0.49
DDX54-207ENST00000550016 UQCRHLA0A096LP55 91 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 C1orf226A1L170 272 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 SEC22BO75396 215 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 PRB1P04280 392 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 UQCRHP07919 91 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 ANXA4P09525 319 aaPredicted RBP18.09■□□□□ 0.49
DDX54-207ENST00000550016 TNNI3P19429 210 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 GSTM5P46439 218 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 NFATC3Q12968 1075 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 CRB2Q5IJ48 1285 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 H3F3CQ6NXT2 135 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 ISLR2Q6UXK2 745 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 TRIM42Q8IWZ5 723 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 SIRT6Q8N6T7 355 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 B3GNT7Q8NFL0 401 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 OR2T11Q8NH01 316 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 ELP5Q8TE02 316 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 C16orf78Q8WTQ4 265 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 DAZLQ92904 295 aaKnown RBP18.09■□□□□ 0.49
DDX54-207ENST00000550016 DGAT2Q96PD7 388 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 LMF1Q96S06 567 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 CCT7Q99832 543 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 C20orf27Q9GZN8 174 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 ACBD3Q9H3P7 528 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 LRTM1Q9HBL6 345 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 C1orf109Q9NX04 203 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 PTGFRNQ9P2B2 879 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 PPIEQ9UNP9 301 aaKnown RBP18.09■□□□□ 0.49
DDX54-207ENST00000550016 CLCA3PQ9Y6N3 262 aa18.09■□□□□ 0.49
DDX54-207ENST00000550016 PIP5K1BO14986 540 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 DPM1O60762 260 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 COX7A2P14406 83 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 ALOX15P16050 662 aaPredicted RBP18.08■□□□□ 0.48
DDX54-207ENST00000550016 PIK3R1P27986 724 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 STT3AP46977 705 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 TAS2R50P59544 299 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 BST1Q10588 318 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 NR6A1Q15406 480 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 NOXRED1Q6NXP6 359 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 IGFL3Q6UXB1 125 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 KIRREL3Q8IZU9 778 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 OR4K14Q8NGD5 310 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 OR14A16Q8NHC5 309 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 RAB3IL1Q8TBN0 382 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 PTPMT1Q8WUK0 201 aaPredicted RBP18.08■□□□□ 0.48
DDX54-207ENST00000550016 RBM18Q96H35 190 aaKnown RBP18.08■□□□□ 0.48
DDX54-207ENST00000550016 SORT1Q99523 831 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 PELOQ9BRX2 385 aaKnown RBP18.08■□□□□ 0.48
DDX54-207ENST00000550016 EBPLQ9BY08 206 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 PFDN4Q9NQP4 134 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 CES1P1Q9UKY3 287 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 PSME2Q9UL46 239 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 DLGAP4Q9Y2H0 992 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 SPTA1P02549 2419 aa18.08■□□□□ 0.48
DDX54-207ENST00000550016 BOD1L1Q8NFC6 3051 aa18.07■□□□□ 0.48
DDX54-207ENST00000550016 A8MUI8 341 aa18.07■□□□□ 0.48
DDX54-207ENST00000550016 DRD2P14416 443 aa18.07■□□□□ 0.48
DDX54-207ENST00000550016 SOX11P35716 441 aa18.07■□□□□ 0.48
DDX54-207ENST00000550016 GPR143P51810 404 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms