RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PCDHGB6Q9Y5F9 930 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 C9P02748 559 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 RPLP0P05388 317 aaKnown RBP10.57□□□□□ -0.72
LINC00661-204ENST00000549354 JUNDP17535 347 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 TAS2R50P59544 299 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 DUOXA1Q1HG43 343 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 VASH1Q7L8A9 365 aaPredicted RBP10.57□□□□□ -0.72
LINC00661-204ENST00000549354 THOC6Q86W42 341 aaKnown RBP10.57□□□□□ -0.72
LINC00661-204ENST00000549354 HUS1BQ8NHY5 278 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 ASZ1Q8WWH4 475 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 USP7Q93009 1102 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 NEIL2Q969S2 332 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 AP2M1Q96CW1 435 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 QRSL1Q9H0R6 528 aaKnown RBP10.57□□□□□ -0.72
LINC00661-204ENST00000549354 MAGIXQ9H6Y5 334 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 ADPRHL2Q9NX46 363 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 RPS6KA6Q9UK32 745 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
LINC00661-204ENST00000549354 FAM186AA6NE01 2351 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 SLC5A10A0PJK1 596 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ERAL1O75616 437 aaKnown RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ADORA3P0DMS8 318 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 LAMP2P13473 410 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ACVR2AP27037 513 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 IL12RB1P42701 662 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 CRYBA2P53672 197 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 AP1S2P56377 157 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 OR2B6P58173 313 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 HBA1P69905 142 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 IL18R1Q13478 541 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 KEAP1Q14145 624 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 GGTA1PQ4G0N0 100 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ATAT1Q5SQI0 421 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 LRRC70Q7Z2Q7 622 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 FAM124AQ86V42 546 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 UBASH3BQ8TF42 649 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 XAGE5Q8WWM1 108 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 KCNK12Q9HB15 430 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 MIEF1Q9NQG6 463 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 SERTM1A2A2V5 107 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 GRXCR2A6NFK2 248 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ARHGEF33A8MVX0 844 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 NPC1O15118 1278 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 KMOO15229 486 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 OR10H3O60404 316 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 LILRB5O75023 590 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 GUCY1B2O75343 617 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 PSIP1O75475 530 aaKnown RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 KAT7O95251 611 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 APOA1P02647 267 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 AMD1P17707 334 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 MAPK9P45984 424 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 PPM1FP49593 454 aaPredicted RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 LRIF1Q5T3J3 769 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 AGTRAPQ6RW13 159 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ERN2Q76MJ5 926 aaKnown RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 B3GNT7Q8NFL0 401 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 TRNT1Q96Q11 434 aaKnown RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 CTRCQ99895 268 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 DOCK9Q9BZ29 2069 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 SLC29A3Q9BZD2 475 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 HOXD1Q9GZZ0 328 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 SPNS1Q9H2V7 528 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 MMP27Q9H306 513 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 CLEC2DQ9UHP7 191 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 GPR52Q9Y2T5 361 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 PCDHGB1Q9Y5G3 927 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 WDFY4Q6ZS81 3184 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 TBC1D3BA6NDS4 549 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 PSMB5P28074 263 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 MAGEA2P43356 314 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 TMEM115Q12893 351 aaPredicted RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF385BQ569K4 471 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 ZC3H12BQ5HYM0 836 aaKnown RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 LINC00615Q96LM1 132 aaPredicted RBP10.56□□□□□ -0.72
LINC00661-204ENST00000549354 SLC35A5Q9BS91 424 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 CCNB1IP1Q9NPC3 277 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 CARD8Q9Y2G2 431 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 IFT52Q9Y366 437 aa10.56□□□□□ -0.72
LINC00661-204ENST00000549354 PRRC2CQ9Y520 2896 aaKnown RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 CLCA1A8K7I4 914 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 FAM47E-STBD1D6RA91 191 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 NPIPB8E9PQR5 432 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 CYP2A7P20853 494 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 RGS6P49758 472 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 AGERQ15109 404 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ARMC4Q5T2S8 1044 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 TMIGD1Q6UXZ0 262 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 PTCHD4Q6ZW05 846 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 EIF3MQ7L2H7 374 aaKnown RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 GALNT13Q8IUC8 556 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 DNAJC22Q8N4W6 341 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 FBXO15Q8NCQ5 510 aaPredicted RBP10.55□□□□□ -0.72
LINC00661-204ENST00000549354 SUSD6Q92537 303 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ZNF566Q969W8 418 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 COL26A1Q96A83 441 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 ASIC5Q9NY37 505 aa10.55□□□□□ -0.72
LINC00661-204ENST00000549354 MUTYHQ9UIF7 546 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms