RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TEX10Q9NXF1 929 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-206ENST00000547764 PCDHGA10Q9Y5H3 936 aa17.48■□□□□ 0.39
PRPF40B-206ENST00000547764 CLCA3PQ9Y6N3 262 aa17.48■□□□□ 0.39
PRPF40B-206ENST00000547764 GCN1Q92616 2671 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 TRBV11-1A0A0K0K1C0 115 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 ERLIN1O75477 346 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 TNNI3P19429 210 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 CLCN2P51788 898 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 MAPK12P53778 367 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 HMGCS1Q01581 520 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 SCIMPQ6UWF3 145 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 EXOC3L1Q86VI1 746 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 RPS19BP1Q86WX3 136 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 CISD2Q8N5K1 135 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 C1orf52Q8N6N3 182 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 C7orf57Q8NEG2 295 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 OR1N1Q8NGS0 311 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 OR14A16Q8NHC5 309 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 CHTF18Q8WVB6 975 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 DAZLQ92904 295 aaKnown RBP17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 NCLNQ969V3 563 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 VMP1Q96GC9 406 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 DEFB126Q9BYW3 111 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 CENPHQ9H3R5 247 aa17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 ZNF223Q9UK11 482 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-206ENST00000547764 SERTM1A2A2V5 107 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 OR5H15A6NDH6 313 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 C17orf105B2RV13 164 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 PGRMC2O15173 223 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 CRCPO75575 148 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 WISP1O95388 367 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 GPR75O95800 540 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 SERPINB3P29508 390 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 STT3AP46977 705 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 ST13P50502 369 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 ASPHQ12797 758 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 BIKQ13323 160 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 TNFAIP8L3Q5GJ75 292 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 BEND6Q5SZJ8 279 aaPredicted RBP17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 LRIG3Q6UXM1 1119 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 LGI4Q8N135 537 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 MORN4Q8NDC4 146 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 PPWD1Q96BP3 646 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 SNRNP40Q96DI7 357 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 C19orf60Q96EN9 201 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 DGAT2Q96PD7 388 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 ABI3Q9P2A4 366 aa17.46■□□□□ 0.39
PRPF40B-206ENST00000547764 TRAV17A0A0B4J275 112 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 GABRR3A8MPY1 467 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 CTIFO43310 598 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 DDAH2O95865 285 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 ALOX15P16050 662 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 ETV4P43268 484 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 MLF1P58340 268 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 NDUFAF5Q5TEU4 345 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 OR52E8Q6IFG1 317 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 DGAT2L6Q6ZPD8 337 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 CROCCP2Q86T23 111 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 ZNF321PQ8N8H1 164 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 THAP3Q8WTV1 239 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 TM4SF18Q96CE8 201 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 APIPQ96GX9 242 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 RBM18Q96H35 190 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 TRMOQ9BU70 441 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 OR8D2Q9GZM6 311 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 ANKRD10Q9NXR5 420 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 MAP10Q9P2G4 905 aa17.45■□□□□ 0.38
PRPF40B-206ENST00000547764 PRKNO60260 465 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 GUCY1B2O75343 617 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 UROSP10746 265 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 COX7A2P14406 83 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 CD96P40200 585 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 RAE1P78406 368 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 PLIN5Q00G26 463 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 BTKQ06187 659 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 TUBA3CQ13748 450 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 SPIN4Q56A73 249 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 CLEC6AQ6EIG7 209 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 TUBA3EQ6PEY2 450 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 ST13P4Q8IZP2 240 aaPredicted RBP17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 ARMC10Q8N2F6 343 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 SLC2A12Q8TD20 617 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 PGM2Q96G03 612 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 UTP23Q9BRU9 249 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 SSU72Q9NP77 194 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 ASF1BQ9NVP2 202 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 MCM8Q9UJA3 840 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 PCDHA9Q9Y5H5 950 aa17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 COPG1Q9Y678 874 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 PRRC2CQ9Y520 2896 aaKnown RBP17.44■□□□□ 0.38
PRPF40B-206ENST00000547764 A0A1W2PS29 197 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 NPHS1O60500 1241 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 ZFAND5O76080 213 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 CHRNGP07510 517 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 BPGMP07738 259 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 TRA2BP62995 288 aaKnown RBP17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 ACSM2AQ08AH3 577 aa17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 ARL13AQ5H913 290 aaPredicted RBP17.43■□□□□ 0.38
PRPF40B-206ENST00000547764 ZNF468Q5VIY5 522 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms