RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 GAB1Q13480 694 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 FAM53BQ14153 422 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 GK3PQ14409 553 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CEBPEQ15744 281 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 FAM214AQ32MH5 1076 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 LRRC23Q53EV4 343 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 SFT2D3Q587I9 215 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CRB2Q5IJ48 1285 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 PIWIL3Q7Z3Z3 882 aaKnown RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF438Q7Z4V0 828 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 SPRED1Q7Z699 444 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 KRT73Q86Y46 540 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 HIPK1Q86Z02 1210 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ZC3H7AQ8IWR0 971 aaKnown RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 DNAJC22Q8N4W6 341 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 PNPT1Q8TCS8 783 aaKnown RBP12.71□□□□□ -0.37
PTCH1-215ENST00000547672 NRBF2Q96F24 287 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 VPS50Q96JG6 964 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF597Q96LX8 424 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 RDH12Q96NR8 316 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ZNF347Q96SE7 839 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 DPYSL5Q9BPU6 564 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 DOHHQ9BU89 302 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 AICDAQ9GZX7 198 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 GLIPR2Q9H4G4 154 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CXorf36Q9H7Y0 433 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 COQ10BQ9H8M1 238 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 IL1RAPQ9NPH3 570 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 NLGN3Q9NZ94 848 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CALML5Q9NZT1 146 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 KCMF1Q9P0J7 381 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 CES1P1Q9UKY3 287 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 ERVK-11Q9UQG0 969 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 MAP4K5Q9Y4K4 846 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 SLCO1B1Q9Y6L6 691 aa12.71□□□□□ -0.37
PTCH1-215ENST00000547672 SLC9B1P1A6NJY1 282 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 G3V2T6 193 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 TPST1O60507 370 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 GALR3O60755 368 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 B3GALT4O96024 378 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 HPRP00739 348 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 FABP3P05413 133 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ETFAP13804 333 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF26P17031 533 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 MLLT3P42568 568 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 AQP4P55087 323 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 LIM2P55344 173 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 RFX4Q33E94 735 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 DEFB134Q4QY38 66 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ATAD3BQ5T9A4 648 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 PRAMEF8Q5VWM4 474 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 PRAMEF7Q5VXH5 474 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 CWF19L1Q69YN2 538 aaKnown RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 HMBOX1Q6NT76 420 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 USP53Q70EK8 1073 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 CEP68Q76N32 757 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF551Q7Z340 670 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ARMC8Q8IUR7 673 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ZDHHC21Q8IVQ6 265 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 LRRC25Q8N386 305 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 GALNT4Q8N4A0 578 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 TTC29Q8NA56 475 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 MIPOL1Q8TD10 442 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 NCSTNQ92542 709 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 SLC35G5Q96KT7 338 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF570Q96NI8 536 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 CIB1Q99828 191 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 MAPKAP1Q9BPZ7 522 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 MACROD1Q9BQ69 325 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 IL21RQ9HBE5 538 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 CD320Q9NPF0 282 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 PTGFRNQ9P2B2 879 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 IFT80Q9P2H3 777 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-215ENST00000547672 P2RX2Q9UBL9 471 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 RAPGEFL1Q9UHV5 662 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 PILRBQ9UKJ0 227 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 LIPT1Q9Y234 373 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 PCDHGB3Q9Y5G1 929 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 ORC6Q9Y5N6 252 aa12.7□□□□□ -0.38
PTCH1-215ENST00000547672 TDRD6O60522 2096 aaKnown RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 LOC105369274A0A096LPK9 316 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 LOC102723532A0A0G2JNH3 316 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 CLDN4O14493 209 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 PGRMC2O15173 223 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 TOX3O15405 576 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ASNA1O43681 348 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 TDGF1P13385 188 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 PVRP15151 417 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ST6GAL1P15907 406 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 PORP16435 677 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF23P17027 643 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 MATN1P21941 496 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ALDH4A1P30038 563 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 MAGEA2P43356 314 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms