RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GTF2H2CQ6P1K8 395 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SPSB3Q6PJ21 355 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 PRSS57Q6UWY2 283 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.85□□□□□ -1.794e-6■■■■□ 20.5
SCAF11-210ENST00000547654 IL17RELQ6ZVW7 336 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF554Q86TJ5 538 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 FJX1Q86VR8 437 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ODF3L1Q8IXM7 274 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 OTUD6BQ8N6M0 293 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF397Q8NF99 534 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 GPRC5AQ8NFJ5 357 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 TRIM58Q8NG06 486 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SAP25Q8TEE9 199 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 GIPC3Q8TF64 312 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 HIST1H2ACQ93077 130 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 FBXO32Q969P5 355 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SENP8Q96LD8 212 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 CXorf58Q96LI9 332 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF583Q96ND8 569 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 PSKH2Q96QS6 385 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 TBC1D10AQ9BXI6 508 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 CRNKL1Q9BZJ0 848 aaKnown RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 THAP2Q9H0W7 228 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF701Q9NV72 531 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SLC38A7Q9NVC3 462 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF224Q9NZL3 707 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ERVK-18Q9QC07 812 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 KCNG2Q9UJ96 466 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 MRTO4Q9UKD2 239 aaKnown RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ZNF490Q9ULM2 529 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-210ENST00000547654 SLC7A7Q9UM01 511 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 C2CD2Q9Y426 696 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 ETV7Q9Y603 341 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 NPATQ14207 1427 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 AGLP35573 1532 aa3.85□□□□□ -1.79
SCAF11-210ENST00000547654 DEPDC5O75140 1603 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CCL24O00175 119 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 PRRG1O14668 218 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 MID1O15344 667 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 DCXO43602 365 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 KCNJ13O60928 360 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 ERLIN1O75477 346 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 SURF6O75683 361 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 KDM4BO94953 1096 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CLDN14O95500 239 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 GLUD1P00367 558 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 APRTP07741 180 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CCDC159P0C7I6 412 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 IQCF3P0C7M6 154 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 ODC1P11926 461 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CEACAM1P13688 526 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 IL4RP24394 825 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 DPP4P27487 766 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 DLSTP36957 453 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 ALDH3B1P43353 468 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 SLC1A6P48664 564 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 GLUD2P49448 558 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 PEX5P50542 639 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 MAZP56270 477 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 MSLNQ13421 630 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 RFTN1Q14699 578 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 SPHARQ15513 63 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 TAF13Q15543 124 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 HLFQ16534 295 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 ADPRMQ3LIE5 342 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 C9orf57Q5W0N0 161 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CWC27Q6UX04 472 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CREB3L2Q70SY1 520 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 NANOGNBQ7Z5D8 188 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CPEB2Q7Z5Q1 589 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 YRDCQ86U90 279 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 FAM131BQ86XD5 332 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 SLC43A2Q8N370 569 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 GBP7Q8N8V2 638 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 LRTM2Q8N967 370 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 LMNTD1Q8N9Z9 388 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 KCNH5Q8NCM2 988 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 OR1J1Q8NGS3 322 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 AKR7LQ8NHP1 331 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 PHLDA1Q8WV24 401 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 TMEM45BQ96B21 275 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 DHTKD1Q96HY7 919 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 VPS35Q96QK1 796 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CCDC3Q9BQI4 270 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 RTP3Q9BQQ7 232 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 C5orf66Q9H5L9 145 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 YY1AP1Q9H869 796 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 APOBEC3GQ9HC16 384 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 RAVER2Q9HCJ3 691 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 TCF7L2Q9NQB0 619 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 FGF21Q9NSA1 209 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 DDX28Q9NUL7 540 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 CLEC4AQ9UMR7 237 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 FOXJ3Q9UPW0 622 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 VDAC3Q9Y277 283 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 ATG4BQ9Y4P1 393 aa3.84□□□□□ -1.79
SCAF11-210ENST00000547654 PDS5AQ29RF7 1337 aaKnown RBP3.84□□□□□ -1.79
SCAF11-210ENST00000547654 UGGT2Q9NYU1 1516 aa3.84□□□□□ -1.8
SCAF11-210ENST00000547654 IGLV5-52A0A0A0MRZ9 124 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms