RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 OR51B4Q9Y5P0 310 aa13.54□□□□□ -0.24
SRP54-202ENST00000546080 WASHC1A8K0Z3 465 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 HEPACAM2A8MVW5 462 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 B8ZZF3 427 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 FFAR1O14842 300 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 ORC5O43913 435 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 RECKO95980 971 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 ZNF30P17039 623 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 ZNF8P17098 575 aaPredicted RBP13.53□□□□□ -0.24
SRP54-202ENST00000546080 MAPK8P45983 427 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 INPP1P49441 399 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 STK19P49842 368 aaPredicted RBP13.53□□□□□ -0.24
SRP54-202ENST00000546080 RPS13P62277 151 aaKnown RBP13.53□□□□□ -0.24
SRP54-202ENST00000546080 OCLNQ16625 522 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 DCST1Q5T197 706 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 LAMTOR1Q6IAA8 161 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 CNIH2Q6PI25 160 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 IL17RCQ8NAC3 791 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 OR52P1PQ8NH57 321 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 BHMTQ93088 406 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 GFM1Q96RP9 751 aaKnown RBP13.53□□□□□ -0.24
SRP54-202ENST00000546080 PCDHGB7Q9Y5F8 929 aa13.53□□□□□ -0.24
SRP54-202ENST00000546080 IGLV3-16A0A075B6K0 115 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 LEUTXA8MZ59 168 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 MEN1O00255 615 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 SLC30A4O14863 429 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 SHOXO15266 292 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 GPR37L1O60883 481 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 SRPRAP08240 638 aaKnown RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 ARSBP15848 533 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 PRKACBP22694 351 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 IRS1P35568 1242 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 ETV5P41161 510 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 ETV1P50549 477 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 RAB25P57735 213 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 WDR5P61964 334 aaKnown RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 RPS25P62851 125 aaKnown RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 NAE1Q13564 534 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 IL18Q14116 193 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 NFE2L1Q14494 772 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 SEC23BQ15437 767 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 PLK5Q496M5 336 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 CRTC2Q53ET0 693 aaPredicted RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 RETSATQ6NUM9 610 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 SERPINA13PQ6UXR4 307 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 CEACAM20Q6UY09 585 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 IDO2Q6ZQW0 420 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 ABI3BPQ7Z7G0 1075 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 RTN4RL1Q86UN2 441 aaPredicted RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 SYT14Q8NB59 555 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 OR7G3Q8NG95 312 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 WFDC5Q8TCV5 224 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 PPCDCQ96CD2 204 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 HDHD5Q9BXW7 423 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 POLR2J3Q9H1A7 115 aaKnown RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.24
SRP54-202ENST00000546080 TMEM161AQ9NX61 479 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 TVP23BQ9NYZ1 205 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 MAT2BQ9NZL9 334 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 RNF181Q9P0P0 153 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 GSTK1Q9Y2Q3 226 aa13.52□□□□□ -0.24
SRP54-202ENST00000546080 STK25O00506 426 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 TSC22D2O75157 780 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 SLC43A1O75387 559 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 GBAP04062 536 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 ATP1B2P14415 290 aaPredicted RBP13.52□□□□□ -0.25
SRP54-202ENST00000546080 ELAVL4P26378 380 aaKnown RBP13.52□□□□□ -0.25
SRP54-202ENST00000546080 SERPINA4P29622 427 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 CAV3P56539 151 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 MC1RQ01726 317 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 PUM1Q14671 1186 aaKnown RBP eCLIP13.52□□□□□ -0.25
SRP54-202ENST00000546080 GPR162Q16538 588 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 RFLNAQ6ZTI6 216 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 SLC24A5Q71RS6 500 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 SLC30A8Q8IWU4 369 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 CELF5Q8N6W0 485 aaKnown RBP13.52□□□□□ -0.25
SRP54-202ENST00000546080 TMEM145Q8NBT3 493 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 C2orf15Q8WU43 125 aaKnown RBP13.52□□□□□ -0.25
SRP54-202ENST00000546080 AKAP1Q92667 903 aaKnown RBP eCLIP13.52□□□□□ -0.25
SRP54-202ENST00000546080 MTERF3Q96E29 417 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 QRFPRQ96P65 431 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 ARPC5LQ9BPX5 153 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 FAM8A1Q9UBU6 413 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 SLC23A1Q9UHI7 598 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 DOCK3Q8IZD9 2030 aa13.52□□□□□ -0.25
SRP54-202ENST00000546080 FAAHO00519 579 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 CASKO14936 926 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 TLX2O43763 284 aaPredicted RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 HPGDSO60760 199 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 IGSF6O95976 241 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 FAM157BP0CG42 384 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 NR2F6P10588 404 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 WNT4P56705 351 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 DSTNP60981 165 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 P2RY14Q15391 338 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 SF3A2Q15428 464 aaKnown RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 TOR2AQ5JU69 321 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms