RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 UGT2A1Q9Y4X1 527 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 MAU2Q9Y6X3 613 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 E7ENX8 843 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 DENRO43583 198 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 INMTO95050 263 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CLIC3O95833 236 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF20P17024 532 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 RGRP47804 291 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 SLC6A11P48066 632 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 SLC7A9P82251 487 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 MED22Q15528 200 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 LCN1P1Q5VSP4 162 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 SYVN1Q86TM6 617 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 NPAS3Q8IXF0 933 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CHST14Q8NCH0 376 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 PDPRQ8NCN5 879 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CEP76Q8TAP6 659 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 WFDC5Q8TCV5 224 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 TRUB1Q8WWH5 349 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 C1GALT1C1Q96EU7 318 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 SLC47A1Q96FL8 570 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 GINS4Q9BRT9 223 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 P2RX2Q9UBL9 471 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 POLHQ9Y253 713 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 I3L521 148 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 ADAMDEC1O15204 470 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 DCNP07585 359 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 HLA-FP30511 346 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 GJA4P35212 333 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 HTR2BP41595 481 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 RPL34P49207 117 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 HNRNPFP52597 415 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CLDN2P57739 230 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 LASP1Q14847 261 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 NNATQ16517 81 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 DGUOKQ16854 277 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 HTR3DQ70Z44 454 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 PPP1R3BQ86XI6 285 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 IMP4Q96G21 291 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 WDR77Q9BQA1 342 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 TTYH2Q9BSA4 534 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 SLC29A3Q9BZD2 475 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 MRM3Q9HC36 420 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 QPCTLQ9NXS2 382 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CLEC4EQ9ULY5 219 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 SRPK3Q9UPE1 567 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 BTBD3Q9Y2F9 522 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 WDR45Q9Y484 360 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 PSAT1Q9Y617 370 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 UBE2QL1A1L167 161 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 FAM172BPA6NC97 362 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 PSMD9O00233 223 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 LATO43561 262 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 IGHEP01854 428 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CYP4B1P13584 511 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CRHR1P34998 444 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CDH12P55289 794 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 TSPAN5P62079 268 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 VWA5B1Q5TIE3 1220 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 TICAM1Q8IUC6 712 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 CILP2Q8IUL8 1156 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 MFSD6LQ8IWD5 586 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 VN1R2Q8NFZ6 395 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 OR14L1PQ8NHC6 308 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 C1orf216Q8TAB5 229 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 LRTOMTQ8WZ04 291 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 AIFM2Q9BRQ8 373 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 PDCD10Q9BUL8 212 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 GATA5Q9BWX5 397 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF358Q9NW07 568 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 ASB6Q9NWX5 421 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 LYARQ9NX58 379 aaKnown RBP8.24□□□□□ -1.09
CLIP1-218ENST00000545889 RIMKLBQ9ULI2 386 aa8.24□□□□□ -1.09
CLIP1-218ENST00000545889 ATP6V1G2-DDX39BF2Z307 99 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 PIP5K1BO14986 540 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 HSPA12AO43301 675 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 KCNJ13O60928 360 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 VNN2O95498 520 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 CSTBP04080 98 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GDF5P43026 501 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 EIF1AXP47813 144 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 NOVA1P51513 510 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 XKP51811 444 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 RRADP55042 308 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 MCCD1P59942 119 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 DEFB110Q30KQ9 67 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 IFI44LQ53G44 452 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 CATSPEREQ5SY80 951 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 HMBOX1Q6NT76 420 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 ANKRD54Q6NXT1 300 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 FARSBQ9NSD9 589 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 MCUBQ9NWR8 336 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 CRNNQ9UBG3 495 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 DRGXA6NNA5 263 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 AFF3P51826 1226 aaKnown RBP8.23□□□□□ -1.09
CLIP1-218ENST00000545889 CDKL1Q00532 357 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 GALK2Q01415 458 aa8.23□□□□□ -1.09
CLIP1-218ENST00000545889 MEF2AQ02078 507 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms