RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 CD83Q01151 205 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 VEZF1Q14119 521 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM236Q5W0B7 351 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 WASH2PQ6VEQ5 465 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 GALNT12Q8IXK2 581 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 OR56A3Q8NH54 315 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 THAP6Q8TBB0 222 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM234Q8WY98 164 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 TAS2R10Q9NYW0 307 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 IRS2Q9Y4H2 1338 aa12□□□□□ -0.49
COL4A6-209ENST00000545689 RPP14O95059 124 aaKnown RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 MEF2AQ02078 507 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 UBXN2BQ14CS0 331 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 ALG1LQ6GMV1 187 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 ENPP6Q6UWR7 440 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 UBE2Q1Q7Z7E8 422 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 PRSS58Q8IYP2 241 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 RMI1Q9H9A7 625 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CSNK1G1Q9HCP0 422 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 PRTFDC1Q9NRG1 225 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 SCP2D1Q9UJQ7 156 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 TRPM3Q9HCF6 1732 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 RGS9O75916 674 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CFL1P23528 166 aaKnown RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 DGKEP52429 567 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 SNTA1Q13424 505 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 ELOCQ15369 112 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 RTP2Q5QGT7 225 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 GLT8D1Q68CQ7 371 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 PYHIN1Q6K0P9 492 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 ARHGAP11AQ6P4F7 1023 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CRTC1Q6UUV9 634 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 OR4K17Q8NGC6 315 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 THEM6Q8WUY1 208 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM125Q96AQ2 219 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF559Q9BR84 538 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM184CQ9NVA4 438 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM14AQ9Y6G1 99 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF41P51814 821 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 SLAMF1Q13291 335 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 GRM2Q14416 872 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 SCD5Q86SK9 330 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM40Q8WWA1 233 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 FCAMRQ8WWV6 532 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 RHBDF1Q96CC6 855 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 MGLLQ99685 303 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 P2RY13Q9BPV8 354 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 PAAF1Q9BRP4 392 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 WACQ9BTA9 647 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 A0A1B0GVI7 797 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CD47Q08722 323 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 NEIL3Q8TAT5 605 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 C16orf78Q8WTQ4 265 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM165Q9HC07 324 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CENPMQ9NSP4 180 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 PHYHO14832 338 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 DBIP07108 87 aaKnown RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 AMZ1Q400G9 498 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 SLC36A3Q495N2 470 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CGB2Q6NT52 195 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 OR52P1PQ8NH57 321 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 ISG20Q96AZ6 181 aaKnown RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CMKLR1Q99788 373 aa11.99□□□□□ -0.49
COL4A6-209ENST00000545689 POLDIP3Q9BY77 421 aaKnown RBP11.99□□□□□ -0.49
COL4A6-209ENST00000545689 CAPN3P20807 821 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GPX3P22352 226 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 PCGF2P35227 344 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ARPC4P59998 168 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 SPHARQ15513 63 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GTF2IRD2BQ6EKJ0 949 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GTF2IRD2Q86UP8 949 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GHDCQ8N2G8 530 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 RBP7Q96R05 134 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 KLRF1Q9NZS2 232 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 IL4RP24394 825 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 TAS2R38P59533 333 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 DNASE1L3Q13609 305 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 CPZQ66K79 652 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 KCTD18Q6PI47 426 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-209ENST00000545689 SETD6Q8TBK2 473 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 KLHDC7BQ96G42 594 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 INMT-MINDY4F8WBC2 141 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 B4GALT2O60909 372 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF140P52738 457 aaPredicted RBP11.98□□□□□ -0.49
COL4A6-209ENST00000545689 GFOD2Q3B7J2 385 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 WDR45BQ5MNZ6 344 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 TRIM74Q86UV6 250 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ALDH16A1Q8IZ83 802 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 OR51G2Q8NGK0 314 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 PTERQ96BW5 349 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 ZDHHC12Q96GR4 267 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 SLC6A15Q9H2J7 730 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 EXTL2Q9UBQ6 330 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 A8MUA0 341 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 PSMD9O00233 223 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 RNASET2O00584 256 aaKnown RBP11.98□□□□□ -0.49
COL4A6-209ENST00000545689 AURKAO14965 403 aa11.98□□□□□ -0.49
COL4A6-209ENST00000545689 LRRTM2O43300 516 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms