RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CD83Q01151 205 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 ZNF404Q494X3 552 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 C10orf62Q5T681 223 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 TMEM236Q5W0B7 351 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 KANK2Q63ZY3 851 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 OR4C11Q6IEV9 310 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 SLC27A4Q6P1M0 643 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 LHFPL3Q86UP9 236 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 CCDC36Q8IYA8 594 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 ZNF548Q8NEK5 533 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 OR5AR1Q8NGP9 310 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 SHKBP1Q8TBC3 707 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 PEX11GQ96HA9 241 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 HSPA12BQ96MM6 686 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 MT-ND5P03915 603 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 TNFRSF1BP20333 461 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 ZNF550Q7Z398 422 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 TMED4Q7Z7H5 227 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 SLC22A16Q86VW1 577 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 KLHDC8AQ8IYD2 350 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 PIANPQ8IYJ0 282 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 ANKFN1Q8N957 763 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 SLC7A6OSQ96CW6 309 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 OR5K4A6NMS3 321 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 ANHXE9PGG2 379 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 KIAA0319Q5VV43 1072 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 LIPKQ5VXJ0 399 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 LETMD1Q6P1Q0 360 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 TRIM73Q86UV7 250 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 MDGA1Q8NFP4 955 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 MYLIPQ8WY64 445 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 ZBTB20Q9HC78 741 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 TIGARQ9NQ88 270 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 S100A9P06702 114 aaKnown RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 SHC2P98077 582 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 ENDOVQ8N8Q3 282 aaKnown RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 ZBED3Q96IU2 234 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 MSLNLQ96KJ4 702 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 TMEM165Q9HC07 324 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 IL17CQ9P0M4 197 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 PLEKHA6Q9Y2H5 1048 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 NOX1Q9Y5S8 564 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 OR14I1A6ND48 311 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 RNH1P13489 461 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 CD72P21854 359 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 VAMP1P23763 118 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 PXNP49023 591 aaPredicted RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 GSCP56915 257 aaPredicted RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 PLCXD2Q0VAA5 305 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 MINDY1Q8N5J2 469 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 OR2L8Q8NGY9 312 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 ZNF675Q8TD23 568 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 SLC45A3Q96JT2 553 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 DEFB126Q9BYW3 111 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 ERVK-18Q9QC07 812 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 AASSQ9UDR5 926 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 PCDHGB5Q9Y5G0 923 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 PCDHGA10Q9Y5H3 936 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 SOCS2O14508 198 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 SCAMP2O15127 329 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 FBLP22087 321 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 FOXA1P55317 472 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 PER3P56645 1201 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 HNRNPA0Q13151 305 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 GRIN2CQ14957 1233 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 COMMD6Q7Z4G1 85 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 ZSWIM9Q86XI8 627 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 DTX3Q8N9I9 347 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 GPR26Q8NDV2 337 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 CD200R1Q8TD46 325 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 CASD1Q96PB1 797 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 SRA1Q9HD15 236 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 STOX2Q9P2F5 926 aaPredicted RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 ZNF69Q9UC07 566 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 WASHC1A8K0Z3 465 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 WASH3PC4AMC7 463 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 SEMA3DO95025 777 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 THEGLP0DJG4 465 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 CEBPBP17676 345 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 MAZP56270 477 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 CDKL1Q00532 357 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 HHEXQ03014 270 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 PRKCDQ05655 676 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 RIN1Q13671 783 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 DUS1LQ6P1R4 473 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 WASH2PQ6VEQ5 465 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 FARSAQ9Y285 508 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 OR52A4PA6NMU1 304 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 SNNO75324 88 aaPredicted RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 SEMA4FO95754 770 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 HRH2P25021 359 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 IST1P53990 364 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 RPS15AP62244 130 aaKnown RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 GTF2IRD2BQ6EKJ0 949 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 GTF2IRD2Q86UP8 949 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 B3GAT2Q9NPZ5 323 aa12.24□□□□□ -0.45
CHD4-211ENST00000544484 ATXN7L1Q9ULK2 861 aaPredicted RBP12.24□□□□□ -0.45
CHD4-211ENST00000544484 PLCL2Q9UPR0 1127 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms