RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 FOLH1Q04609 750 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 DUSP2Q05923 314 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 NRF1Q16656 503 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF750Q32MQ0 723 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 SPDYE7PQ495Y7 208 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ZC3H12BQ5HYM0 836 aaKnown RBP18.73■□□□□ 0.59
COPS7A-218ENST00000543939 TMTC4Q5T4D3 741 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 FAM92BQ6ZTR7 304 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 C6orf120Q7Z4R8 191 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 MCATQ8IVS2 390 aaKnown RBP18.73■□□□□ 0.59
COPS7A-218ENST00000543939 PACRGLQ8N7B6 248 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF597Q96LX8 424 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF681Q96N22 645 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ELF4Q99607 663 aaPredicted RBP18.73■□□□□ 0.59
COPS7A-218ENST00000543939 LYRM4Q9HD34 91 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ZSCAN32Q9NX65 697 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 RAB26Q9ULW5 256 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 PADI4Q9UM07 663 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 C7orf72A4D263 438 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 UPK1AO00322 258 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF682O95780 498 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 C9P02748 559 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 PRIM2P49643 509 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 DSTNP60981 165 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 CSTF1Q05048 431 aaKnown RBP18.72■□□□□ 0.59
COPS7A-218ENST00000543939 SCARB2Q14108 478 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF630Q2M218 657 aaPredicted RBP18.72■□□□□ 0.59
COPS7A-218ENST00000543939 DEFB110Q30KQ9 67 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 PRSS41Q7RTY9 318 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 ARHGEF39Q8N4T4 335 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 OR10Q1Q8NGQ4 319 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 TCTN2Q96GX1 697 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 PRDM9Q9NQV7 894 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 GIMAP4Q9NUV9 329 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 MS4A12Q9NXJ0 267 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 LRIT1Q9P2V4 623 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 DNAJB9Q9UBS3 223 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 EPHA6Q9UF33 1036 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF639Q9UID6 485 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 PILRBQ9UKJ0 227 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 PSME2Q9UL46 239 aa18.72■□□□□ 0.59
COPS7A-218ENST00000543939 A0A1W2PS29 197 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 KIF1CO43896 1103 aaKnown RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 GALR3O60755 368 aaPredicted RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SEMG1P04279 462 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 CTSBP07858 339 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 GPC1P35052 558 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 MAGEA2P43356 314 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 GFERP55789 205 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 CDK6Q00534 326 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 PLK5Q496M5 336 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 TMEM64Q6YI46 380 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 FKBP9P1Q75LS8 142 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 CCDC80Q76M96 950 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 C1orf210Q8IVY1 113 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 CCDC116Q8IYX3 515 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 CBR4Q8N4T8 237 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 HORMAD2Q8N7B1 307 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 ARL10Q8N8L6 244 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 NFKBIDQ8NI38 313 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 VPS50Q96JG6 964 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 C8orf4Q9NR00 106 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 STARD5Q9NSY2 213 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 ARID1BQ8NFD5 2236 aaPredicted RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 TLCD2A6NGC4 264 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 PDLIM1O00151 329 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 DENRO43583 198 aaKnown RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 NUDT21O43809 227 aaKnown RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SRPX2O60687 465 aaPredicted RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 C8orf89P0DMQ9 161 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 FEN1P39748 380 aaKnown RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 ARRB1P49407 418 aaPredicted RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 RPS26P62854 115 aaKnown RBP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SPIDRQ14159 915 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 PRTGQ2VWP7 1150 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.71■□□□□ 0.59
COPS7A-218ENST00000543939 OR52E8Q6IFG1 317 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 CEACAM20Q6UY09 585 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SLC35F3Q8IY50 421 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SFXN5Q8TD22 340 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 TGM7Q96PF1 710 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 CSF3RQ99062 836 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SEMA3GQ9NS98 782 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SUSD2Q9UGT4 822 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF780BQ9Y6R6 833 aa18.71■□□□□ 0.59
COPS7A-218ENST00000543939 SCN2AQ99250 2005 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 ZNF860A6NHJ4 632 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 RASAL1O95294 804 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 CST1P01037 141 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 AQP1P29972 269 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 ALDH4A1P30038 563 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 TLX1P31314 330 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-218ENST00000543939 MPIP34949 423 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 GABRA4P48169 554 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 OLR1P78380 273 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 MED21Q13503 144 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 CYBRD1Q53TN4 286 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 ZC3H7AQ8IWR0 971 aaKnown RBP18.7■□□□□ 0.58
COPS7A-218ENST00000543939 SLC30A8Q8IWU4 369 aa18.7■□□□□ 0.58
COPS7A-218ENST00000543939 HSH2DQ96JZ2 352 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms