RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 DMXL2Q8TDJ6 3036 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 IGHV1-45A0A0A0MS14 117 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 TCRBV16S1A1N1A0A5B0 115 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 A8MUI8 341 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 C17orf105B2RV13 164 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 PGRMC2O15173 223 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 POLR3GO15318 223 aaPredicted RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 FGF17O60258 216 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 GPR75O95800 540 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 JUNP05412 331 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 TROVE2P10155 538 aaKnown RBP eCLIP5.92□□□□□ -1.46
LTBR-212ENST00000543542 PRPS2P11908 318 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 COX6A1P12074 109 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 ICAM2P13598 275 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 DRD2P14416 443 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 NT5EP21589 574 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 EPHA3P29320 983 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 NTSP30990 170 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 GPC1P35052 558 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 HPCAL1P37235 193 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 RPL3P39023 403 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 FEN1P39748 380 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 MDH1P40925 334 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 ASMTP46597 345 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 XKP51811 444 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 AP2B1P63010 937 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 ERVK-8P63133 956 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 PLIN5Q00G26 463 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 RHDQ02161 417 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 SF3A3Q12874 501 aaKnown RBP eCLIP5.92□□□□□ -1.46
LTBR-212ENST00000543542 AIMP2Q13155 320 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 BIKQ13323 160 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 RAPSNQ13702 412 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 EXT1Q16394 746 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 TBR1Q16650 682 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 XKR7Q5GH72 579 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 DCAF10Q5QP82 559 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 C6orf136Q5SQH8 315 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 VWA5B1Q5TIE3 1220 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 IL23RQ5VWK5 629 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 CPZQ66K79 652 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 SLC48A1Q6P1K1 146 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 GALNT18Q6P9A2 607 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 TMEM205Q6UW68 189 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 KIRREL2Q6UWL6 708 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 IKBIPQ70UQ0 350 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 SCUBE1Q8IWY4 988 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 KBTBD2Q8IY47 623 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 FAM9CQ8IZT9 166 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 OR11G2Q8NGC1 345 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 ADAMTS17Q8TE56 1095 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 DAZLQ92904 295 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 EXTL1Q92935 676 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 UCN3Q969E3 161 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 PPWD1Q96BP3 646 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 PPCDCQ96CD2 204 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 THOC3Q96J01 351 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 RILPQ96NA2 401 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 PRPF18Q99633 342 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 CNPPD1Q9BV87 410 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 BRINP2Q9C0B6 783 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 ZNF700Q9H0M5 742 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 PRORYQ9H606 182 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 WDR55Q9H6Y2 383 aaPredicted RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 MEAF6Q9HAF1 191 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 KCNK13Q9HB14 408 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 NPHS2Q9NP85 383 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 MYNNQ9NPC7 610 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 ADAP2Q9NPF8 381 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 SIRT5Q9NXA8 310 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 SH3BP4Q9P0V3 963 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 C5AR2Q9P296 337 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 COPS7AQ9UBW8 275 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 BAIAP2L1Q9UHR4 511 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 HAO1Q9UJM8 370 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 SSUH2Q9Y2M2 353 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 WBP11Q9Y2W2 641 aaKnown RBP5.92□□□□□ -1.46
LTBR-212ENST00000543542 CCL27Q9Y4X3 112 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 KCNMB2Q9Y691 235 aa5.92□□□□□ -1.46
LTBR-212ENST00000543542 NCOR2Q9Y618 2525 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 LOC102723996A0A087X1L8 192 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 A0A0G2JND7 137 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SAGE2PA6NJ88 616 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 WASHC1A8K0Z3 465 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 NPIPB8E9PQR5 432 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 MKRN2OSH3BPM6 223 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 MASP2O00187 686 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 SDHDO14521 159 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 KLHL41O60662 606 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 EDF1O60869 148 aaKnown RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 DNAJB5O75953 348 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 ITGB2P05107 769 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 G6PDP11413 515 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 BCKDHAP12694 445 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 PORP16435 677 aaPredicted RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 SDC1P18827 310 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 CSNK2A2P19784 350 aaPredicted RBP5.91□□□□□ -1.46
LTBR-212ENST00000543542 DDCP20711 480 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 TACR1P25103 407 aa5.91□□□□□ -1.46
LTBR-212ENST00000543542 MPIP34949 423 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms