RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 KCTD8Q6ZWB6 473 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF550Q7Z398 422 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 LAPTM4BQ86VI4 370 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 LGI4Q8N135 537 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 LRRC25Q8N386 305 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 HORMAD2Q8N7B1 307 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 OR6C4Q8NGE1 309 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 MYLIPQ8WY64 445 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FATE1Q969F0 183 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PEX11GQ96HA9 241 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 GORASP1Q9BQQ3 440 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 IL26Q9NPH9 171 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 C14orf105Q9NVL8 296 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 IL17CQ9P0M4 197 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CXXC1Q9P0U4 656 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ACTR3BQ9P1U1 418 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 DAPL1A0PJW8 107 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FEZF1A0PJY2 475 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 OR52A4PA6NMU1 304 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 DRGXA6NNA5 263 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SHOX2O60902 331 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 KCNK5O95279 499 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CSTAP01040 98 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 TP53P04637 393 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 IL3P08700 152 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 IRS1P35568 1242 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 DNAJB13P59910 316 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PLP2Q04941 152 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC18A2Q05940 514 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ANKRD26P1Q6NSI1 321 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 GPAT4Q86UL3 456 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 OR5P2Q8WZ92 322 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 RAB8BQ92930 207 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 DTD2Q96FN9 168 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 LRCH3Q96II8 777 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SORBS1Q9BX66 1292 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 BRD7Q9NPI1 651 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 COMMD9Q9P000 198 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 TBX21Q9UL17 535 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A1W2PP18 115 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 BLOC1S5-TXNDC5H3BN57 136 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PLOD3O60568 738 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CBFA2T3O75081 653 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FOXN2P32314 431 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FAUP35544 74 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC18A1P54219 525 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 GABREP78334 506 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CDK3Q00526 305 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 MBTPS1Q14703 1052 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 Q3ZCU0 254 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PYDC2Q56P42 97 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM69AQ5T7M9 428 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 LPCAT4Q643R3 524 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 REEP3Q6NUK4 255 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SYVN1Q86TM6 617 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 RNF130Q86XS8 419 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF454Q8N9F8 522 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 COX4I2Q96KJ9 171 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 BOCQ9BWV1 1114 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 TBC1D17Q9HA65 648 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 MAN2B2Q9Y2E5 1009 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 MAU2Q9Y6X3 613 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 NHSQ6T4R5 1651 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF208O43345 1280 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC16A8O95907 504 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF20P17024 532 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FOLR3P41439 243 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 NUBP1P53384 320 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM189BP81408 668 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CDKN3Q16667 212 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 KLHL22Q53GT1 634 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 METTL11BQ5VVY1 283 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CYP4V2Q6ZWL3 525 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 GAREM2Q75VX8 874 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 GATSQ8NAP1 163 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 OR5K1Q8NHB7 308 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CD180Q99467 661 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SARGQ9BW04 601 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 TTYH1Q9H313 450 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ABCB10Q9NRK6 738 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ANKMY1Q9P2S6 941 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF225Q9UK10 706 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CIB4A0PJX0 185 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 SMIM30A4D0T7 59 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 AQP12BA6NM10 295 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ANXA2P2A6NMY6 339 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 GFRA2O00451 464 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 CDC40O60508 579 aaKnown RBP eCLIP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 DBIP07108 87 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 ANXA2P07355 339 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TACSTD2P09758 323 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 CCNOP22674 350 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 PEX2P28328 305 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 HOXD9P28356 352 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 TSPAN7P41732 249 aa6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RPL5P46777 297 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-206ENST00000543397 RPS3AP61247 264 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms