RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 ATP6V1G2O95670 118 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 GP1BAP07359 652 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 C8orf89P0DMQ9 161 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 TGM1P22735 817 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 HTR1EP28566 365 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 PDX1P52945 283 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 MVDP53602 400 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 ITGA1P56199 1179 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 MAT1AQ00266 395 aaKnown RBP12.5□□□□□ -0.41
CHFR-221ENST00000542714 BNIP2Q12982 314 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 C6orf163Q5TEZ5 329 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 B3GNT8Q7Z7M8 397 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 IFNEQ86WN2 208 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 NAXDQ8IW45 347 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 C10orf67Q8IYJ2 551 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 OR10A6Q8NH74 314 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 PNPT1Q8TCS8 783 aaKnown RBP12.5□□□□□ -0.41
CHFR-221ENST00000542714 SH3GL1Q99961 368 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 SLC35A5Q9BS91 424 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 THUMPD3Q9BV44 507 aaKnown RBP12.5□□□□□ -0.41
CHFR-221ENST00000542714 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
CHFR-221ENST00000542714 CHST8Q9H2A9 424 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 RPF2Q9H7B2 306 aaKnown RBP12.5□□□□□ -0.41
CHFR-221ENST00000542714 TPT1P8Q9HAU6 139 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 TMEM9BQ9NQ34 198 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 FGF21Q9NSA1 209 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 CUTCQ9NTM9 273 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 FAM86C1Q9NVL1 165 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 GPATCH2Q9NW75 528 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 MS4A12Q9NXJ0 267 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 AP3M1Q9Y2T2 418 aa12.5□□□□□ -0.41
CHFR-221ENST00000542714 ARPC2O15144 300 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 GPX2P18283 190 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 UQCRC2P22695 453 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 NTSP30990 170 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 PTGER1P34995 402 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 SOAT1P35610 550 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 SOX11P35716 441 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 FEN1P39748 380 aaKnown RBP12.49□□□□□ -0.41
CHFR-221ENST00000542714 NCBP2P52298 156 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■□□□ 12.6
CHFR-221ENST00000542714 MANFP55145 182 aaKnown RBP12.49□□□□□ -0.41
CHFR-221ENST00000542714 ZFP36L1Q07352 338 aaKnown RBP12.49□□□□□ -0.41
CHFR-221ENST00000542714 HSPB3Q12988 150 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 CSRP2Q16527 193 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 SYT16Q17RD7 645 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 LCN8Q6JVE9 175 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 TLDC1Q6P9B6 456 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 OR4N5Q8IXE1 308 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 BHLHE22Q8NFJ8 381 aaPredicted RBP12.49□□□□□ -0.41
CHFR-221ENST00000542714 OR5AK3PQ8NH89 298 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.49□□□□□ -0.41
CHFR-221ENST00000542714 FAM120BQ96EK7 910 aaKnown RBP12.49□□□□□ -0.41
CHFR-221ENST00000542714 ZBED6CLQ96FA7 236 aaPredicted RBP12.49□□□□□ -0.41
CHFR-221ENST00000542714 BBS4Q96RK4 519 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 PRRX2Q99811 253 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 ECSITQ9BQ95 431 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 EGFL7Q9UHF1 273 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 PCDHGB4Q9UN71 923 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 ENTPD4Q9Y227 616 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 PCDHB3Q9Y5E6 796 aa12.49□□□□□ -0.41
CHFR-221ENST00000542714 RNF103-CHMP3A0A140T963 221 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 C4orf47A7E2U8 309 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 H0YIG0 161 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 TGFBR3LH3BV60 316 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 AGRPO00253 132 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 FGF17O60258 216 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 PSMG1O95456 288 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 RNH1P13489 461 aaKnown RBP12.48□□□□□ -0.41
CHFR-221ENST00000542714 NCK1P16333 377 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 GGT1P19440 569 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 CSNK2A2P19784 350 aaPredicted RBP12.48□□□□□ -0.41
CHFR-221ENST00000542714 PPIBP23284 216 aaKnown RBP12.48□□□□□ -0.41
CHFR-221ENST00000542714 TLX1P31314 330 aaPredicted RBP12.48□□□□□ -0.41
CHFR-221ENST00000542714 NBL1P41271 181 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 AVPR1BP47901 424 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 ID2Q02363 134 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 ACY1Q03154 408 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 ABHD18Q0P651 414 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 SPIDRQ14159 915 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 C16orf72Q14CZ0 275 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 KIF26BQ2KJY2 2108 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 COX20Q5RI15 118 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHFR-221ENST00000542714 PHF19Q5T6S3 580 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 SAXO2Q658L1 398 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 NIPAL1Q6NVV3 410 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 CYP2R1Q6VVX0 501 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 PTOV1Q86YD1 416 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 ZZZ3Q8IYH5 903 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 MICU2Q8IYU8 434 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 HIPK4Q8NE63 616 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 OR2T12Q8NG77 320 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 OR52N2Q8NGI0 321 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 ZFP28Q8NHY6 868 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 JADE3Q92613 823 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 ANKRD9Q96BM1 317 aaPredicted RBP12.48□□□□□ -0.41
CHFR-221ENST00000542714 MMABQ96EY8 250 aaPredicted RBP12.48□□□□□ -0.41
CHFR-221ENST00000542714 PEX11GQ96HA9 241 aa12.48□□□□□ -0.41
CHFR-221ENST00000542714 RBCK1Q9BYM8 510 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms