RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PADI4Q9UM07 663 aa7.32□□□□□ -1.24
AC005840.3-201ENST00000541888 RUVBL1Q9Y265 456 aaKnown RBP7.32□□□□□ -1.24
AC005840.3-201ENST00000541888 SH3GLB1Q9Y371 365 aa7.32□□□□□ -1.24
AC005840.3-201ENST00000541888 U3KQA8 63 aa7.32□□□□□ -1.24
AC005840.3-201ENST00000541888 LOC400499M0QZD8 3231 aa7.32□□□□□ -1.24
AC005840.3-201ENST00000541888 IGHV1OR21-1A0A087WYE8 117 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 LNP1A1A4G5 178 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CASQ2O14958 399 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SCAMP2O15127 329 aaKnown RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 HNRNPRO43390 633 aaKnown RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 KDM1AO60341 852 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 NCK1P16333 377 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ENGP17813 658 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 FSTP19883 344 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PTX3P26022 381 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PRDX6P30041 224 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MAPK12P53778 367 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 WNT3P56703 355 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CLDN8P56748 225 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ID2Q02363 134 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CBX3Q13185 183 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 STX5Q13190 355 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MAD2L1Q13257 205 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 HERC3Q15034 1050 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 GPR19Q15760 415 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MAPKAPK3Q16644 382 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SYT16Q17RD7 645 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SPIN4Q56A73 249 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ZC3H14Q6PJT7 736 aaKnown RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 DLEU7Q6UYE1 221 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 BNC2Q6ZN30 1099 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 TMEM151BQ8IW70 566 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 TMEM132CQ8N3T6 1108 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MARVELD2Q8N4S9 558 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MINDY1Q8N5J2 469 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ARL10Q8N8L6 244 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 C19orf47Q8N9M1 422 aaKnown RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 BAHD1Q8TBE0 780 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 GTF2H4Q92759 462 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 EXOSC8Q96B26 276 aaKnown RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 LRRC58Q96CX6 371 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 OTUB1Q96FW1 271 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ZC3H10Q96K80 434 aaKnown RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CSF3RQ99062 836 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SERPINI1Q99574 410 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MAPKAP1Q9BPZ7 522 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 KLHL4Q9C0H6 718 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 S100A14Q9HCY8 104 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SERHLQ9NQF3 203 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CMTM6Q9NX76 183 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PILRAQ9UKJ1 303 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SNX7Q9UNH6 387 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ATG4BQ9Y4P1 393 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 AP1M2Q9Y6Q5 423 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 V9GYQ6 96 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SEC16AO15027 2179 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ZFHX2Q9C0A1 2572 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 LAMA5O15230 3695 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 FAM227AF5H4B4 570 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PGRMC2O15173 223 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SLC22A2O15244 555 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CDC123O75794 336 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MYO1DO94832 1006 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 NTRK1P04629 796 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SMIM18P0DKX4 95 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 HSD3B1P14060 373 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SLC6A2P23975 617 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 CXCR2P25025 360 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 HSD3B2P26439 372 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 S100A3P33764 101 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ABATP80404 500 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 DUSP2Q05923 314 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SLAMF1Q13291 335 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 GAB1Q13480 694 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MAPRE2Q15555 327 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 DUOXA1Q1HG43 343 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 C1orf146Q5VVC0 180 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 OR4C11Q6IEV9 310 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 NANOGP8Q6NSW7 305 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 OGFOD3Q6PK18 319 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 RNF165Q6ZSG1 346 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 GALNT10Q86SR1 603 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ASPGQ86U10 573 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 C17orf82Q86X59 251 aaPredicted RBP7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 TICAM1Q8IUC6 712 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 TMEM126BQ8IUX1 230 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 OR4N5Q8IXE1 308 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PGAM4Q8N0Y7 254 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ACOT4Q8N9L9 421 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 FAM47BQ8NA70 645 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MFSD9Q8NBP5 474 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 PYDC1Q8WXC3 89 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 UBE2E3Q969T4 207 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 RGMAQ96B86 450 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SLC22A18Q96BI1 424 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 MAGED4Q96JG8 741 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 FCRL1Q96LA6 429 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ZBTB18Q99592 522 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 ZFYVE21Q9BQ24 234 aa7.31□□□□□ -1.24
AC005840.3-201ENST00000541888 SLX1AQ9BQ83 275 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms