RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 CLPSP04118 112 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 S100BP04271 92 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 TUBB4AP04350 444 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 PCNAP12004 261 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 EPB42P16452 691 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 TNNI3P19429 210 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 POU3F2P20265 443 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 CNR1P21554 472 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 PTGER4P35408 488 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 BSGP35613 385 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 MAGEA12P43365 314 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 STT3AP46977 705 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 RPS13P62277 151 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 RCN2Q14257 317 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 PFKFB4Q16877 469 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 MPEG1Q2M385 716 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 HYAL4Q2M3T9 481 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 AP5B1Q2VPB7 878 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 ZNF791Q3KP31 576 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 LIPJQ5W064 366 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 GPR180Q86V85 440 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 ZCCHC7Q8N3Z6 543 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 TMEM151AQ8N4L1 468 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 L3MBTL4Q8NA19 623 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 WDR20Q8TBZ3 569 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 DOK4Q8TEW6 326 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 RGMAQ96B86 450 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 MRRFQ96E11 262 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 MTERF1Q99551 399 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 ENKD1Q9H0I2 346 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 DDX31Q9H8H2 851 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 COPS7BQ9H9Q2 264 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 SEMA4BQ9NPR2 832 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 NINJ2Q9NZG7 142 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 ADGRE2Q9UHX3 823 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 DMGDHQ9UI17 866 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 RNF11Q9Y3C5 154 aa10.93□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A0A6YYD5 115 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 A8MVJ9 347 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 G3V3Y1 287 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 OR7A17O14581 309 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 TFECO14948 347 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 UGDHO60701 494 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 CPN2P22792 545 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 PTX3P26022 381 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ECHS1P30084 290 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 SERPINB1P30740 379 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 NEK2P51955 445 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ARFIP1P53367 373 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ALDH18A1P54886 795 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 KRTAP10-9P60411 292 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 FOLH1Q04609 750 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 CCDC91Q7Z6B0 441 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 C9orf40Q8IXQ3 194 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 NUBPLQ8TB37 319 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ASB15Q8WXK1 588 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ANP32BQ92688 251 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 TANKQ92844 425 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ISL2Q96A47 359 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 SPOCK3Q9BQ16 436 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 TTTY12Q9BZ98 90 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 RPF2Q9H7B2 306 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 IPPKQ9H8X2 491 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ZBTB26Q9HCK0 441 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 HPF1Q9NWY4 346 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 ERVK-11Q9UQG0 969 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 POLQO75417 2590 aa10.92□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A1B0GTL3 188 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A1B0GVC2 190 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A1W2PS29 197 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 SYCE1LA8MT33 242 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 FOXE1O00358 373 aaPredicted RBP10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 CDC40O60508 579 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 GPR75O95800 540 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 IGHG3P01860 377 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 CELA3AP09093 270 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 SBK3P0C264 359 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 CCL3P10147 92 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 IGFBP2P18065 325 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 SSR2P43308 183 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 PPIAP62937 165 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 TNFRSF17Q02223 184 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 TFF3Q07654 80 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 ASPHQ12797 758 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 BIKQ13323 160 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 CUL3Q13618 768 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 DDX39BQ13838 428 aaKnown RBP10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 GTF2H2Q13888 395 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 CPSF6Q16630 551 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 FAM83EQ2M2I3 478 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 GXYLT1Q4G148 440 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 TECRLQ5HYJ1 363 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 FAM219BQ5XKK7 198 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 GTF2H2CQ6P1K8 395 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 ARHGAP11AQ6P4F7 1023 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 RTL4Q6ZR62 310 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 GOLGA7Q7Z5G4 137 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 CD163Q86VB7 1156 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 TMEM251Q8N6I4 163 aa10.91□□□□□ -0.66
CLSTN3-211ENST00000541667 GOLM1Q8NBJ4 401 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms