RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 IGLV3-21P80748 117 aaPredicted RBP16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 GUCY1A3Q02108 690 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 DPY19L1Q2PZI1 675 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 IRAK1BP1Q5VVH5 260 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 SLC48A1Q6P1K1 146 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 RIPOR1Q6ZS17 1223 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 FAM47EQ6ZV65 393 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 LARP4Q71RC2 724 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 MRGPREQ86SM8 312 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 LAPTM4BQ86VI4 370 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 PRSS58Q8IYP2 241 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 ST13P4Q8IZP2 240 aaPredicted RBP16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 OR2T11Q8NH01 316 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 NSRP1Q9H0G5 558 aaKnown RBP16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 SLCO1B3Q9NPD5 702 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 ADAP2Q9NPF8 381 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 TMEM45AQ9NWC5 275 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 MARCOQ9UEW3 520 aaPredicted RBP16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 TRIM33Q9UPN9 1127 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 MAN2B2Q9Y2E5 1009 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 KALRNO60229 2985 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 PTPRQQ9UMZ3 2332 aa16.45■□□□□ 0.22
CLSTN3-210ENST00000540931 NSG1A0A0A6YYJ2 146 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 GOLGA8QA0A0J9YX86 632 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 GOLGA8OA6NCC3 632 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 GOLGA8NF8WBI6 632 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 CDK2AP1O14519 115 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 CDC123O75794 336 aaPredicted RBP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 GBAP04062 536 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 PRB1P04280 392 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 SLC35E2P0CK97 266 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 IDO1P14902 403 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 CSNK2A2P19784 350 aaPredicted RBP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 MPIP34949 423 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 HPCAL1P37235 193 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 CLNS1AP54105 237 aaKnown RBP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 OR4D2P58180 307 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 RPS18P62269 152 aaKnown RBP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 C2orf80Q0P641 193 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 C19orf57Q0VDD7 668 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 AIMP2Q13155 320 aaKnown RBP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 RPS6KA2Q15349 733 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 ELAVL1Q15717 326 aaKnown RBP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 GSTA3Q16772 222 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 METTL21CQ5VZV1 264 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 EPGNQ6UW88 154 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 OR14A16Q8NHC5 309 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 DNAJB14Q8TBM8 379 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 RNF31Q96EP0 1072 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 CHMP6Q96FZ7 201 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 C3orf30Q96M34 536 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 ALOXE3Q9BYJ1 711 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 ZNF700Q9H0M5 742 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 ATP13A2Q9NQ11 1180 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 P4HTMQ9NXG6 502 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 ENTPD4Q9Y227 616 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 POLR3HQ9Y535 204 aaPredicted RBP16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 HS3ST3B1Q9Y662 390 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 CLCA3PQ9Y6N3 262 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 NUP210LQ5VU65 1888 aa16.44■□□□□ 0.22
CLSTN3-210ENST00000540931 FAM227AF5H4B4 570 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 SDHDO14521 159 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 DIAPH2O60879 1101 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 C1QL1O75973 258 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 IL3P08700 152 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 BCKDHAP12694 445 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 ITPKBP27987 946 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 C21orf58P58505 322 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 SNRPNP63162 240 aaKnown RBP16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 LRRC74AQ0VAA2 488 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 IL23RQ5VWK5 629 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 NXNQ6DKJ4 435 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 FAM71E1Q6IPT2 247 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 JMJD6Q6NYC1 403 aaPredicted RBP16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 SHISA6Q6ZSJ9 500 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 GPR155Q7Z3F1 870 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 PPP1R32Q7Z5V6 425 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 ANKRD37Q7Z713 158 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 APOBEC4Q8WW27 367 aaKnown RBP16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 ERP27Q96DN0 273 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 DGAT2Q96PD7 388 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 RABEP2Q9H5N1 569 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 REEP4Q9H6H4 257 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 TCF7L2Q9NQB0 619 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 TEX10Q9NXF1 929 aaPredicted RBP16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 UTS2RQ9UKP6 389 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 PTGDR2Q9Y5Y4 395 aa16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 MRPS18BQ9Y676 258 aaKnown RBP16.43■□□□□ 0.22
CLSTN3-210ENST00000540931 CFAP46Q8IYW2 2715 aa16.42■□□□□ 0.22
CLSTN3-210ENST00000540931 IGHV1-45A0A0A0MS14 117 aa16.42■□□□□ 0.22
CLSTN3-210ENST00000540931 SOCS6O14544 535 aa16.42■□□□□ 0.22
CLSTN3-210ENST00000540931 UBDO15205 165 aa16.42■□□□□ 0.22
CLSTN3-210ENST00000540931 NKX2-8O15522 239 aa16.42■□□□□ 0.22
CLSTN3-210ENST00000540931 OR10H2O60403 315 aa16.42■□□□□ 0.22
CLSTN3-210ENST00000540931 JRKO75564 520 aa16.42■□□□□ 0.22
CLSTN3-210ENST00000540931 IFNA16P05015 189 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms