RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 GNPDA1P46926 289 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 YBX1P67809 324 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 LRRC74AQ0VAA2 488 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PTGR1Q14914 329 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 COL19A1Q14993 1142 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ZNF782Q6ZMW2 699 aaPredicted RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 USP30Q70CQ3 517 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TMEM179BQ7Z7N9 219 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 LIX1Q8N485 282 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 DPP10Q8N608 796 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 RTL3Q8N8U3 475 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 ZMIZ2Q8NF64 920 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GGHQ92820 318 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 KCTD7Q96MP8 289 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PANX1Q96RD7 426 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CD93Q9NPY3 652 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 DNAJC11Q9NVH1 559 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GLS2Q9UI32 602 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ZNF451Q9Y4E5 1061 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TANC1Q9C0D5 1861 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 IRAK2O43187 625 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 KERAO60938 352 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TOXO94900 526 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PCDH8O95206 1070 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 S1PR4O95977 384 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 OTCP00480 354 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 NR2F6P10588 404 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CKMT1AP12532 417 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CD1DP15813 335 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ARSBP15848 533 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 SSTR2P30874 369 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 MAN2A2P49641 1150 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TEKQ02763 1124 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ZNF33BQ06732 778 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 COL28A1Q2UY09 1125 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CRTC2Q53ET0 693 aaPredicted RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 ALFQ53S48 1182 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 SLC35F1Q5T1Q4 408 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 Q6ZS52 159 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GLT6D1Q7Z4J2 308 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 LAPTM4BQ86VI4 370 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CNTN4Q8IWV2 1026 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PIAS4Q8N2W9 510 aaPredicted RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 HJURPQ8NCD3 748 aaPredicted RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 OR10G2Q8NGC3 310 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CEP76Q8TAP6 659 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 NT5C3BQ969T7 300 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 MTFMTQ96DP5 389 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 TRMT2BQ96GJ1 504 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 TSSK3Q96PN8 268 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ZYG11BQ9C0D3 744 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TMEM168Q9H0V1 697 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ABCG8Q9H221 673 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 BPIFA1Q9NP55 256 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ZDHHC4Q9NPG8 344 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 COPZ2Q9P299 210 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PSORS1C1Q9UIG5 152 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TNPO3Q9Y5L0 923 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 STON1Q9Y6Q2 735 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 LCTP09848 1927 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CACNA1IQ9P0X4 2223 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 MAP1BP46821 2468 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 LRRC72A6NJI9 287 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CDC7O00311 574 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 SLC30A4O14863 429 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ADAMDEC1O15204 470 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 COCHO43405 550 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PRSS23O95084 383 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 LRATO95237 230 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 F11P03951 625 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GSTM5P46439 218 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ATP12AP54707 1039 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 C2orf80Q0P641 193 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ABHD18Q0P651 414 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 SEMA3BQ13214 749 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 AANATQ16613 207 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TRIM61Q5EBN2 209 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 SIRPB2Q5JXA9 342 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PM20D1Q6GTS8 502 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CHST9Q7L1S5 443 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TMEFF1Q8IYR6 380 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ZNF548Q8NEK5 533 aaPredicted RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 VPS37AQ8NEZ2 397 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 OR4K2Q8NGD2 314 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 FBXW5Q969U6 566 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GTPBP3Q969Y2 492 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 IL4I1Q96RQ9 567 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PIGUQ9H490 435 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TUBB1Q9H4B7 451 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 RBFOX1Q9NWB1 397 aaKnown RBP8.31□□□□□ -1.08
DDB1-217ENST00000540166 NKIRAS2Q9NYR9 191 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TRAPPC4Q9Y296 219 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3DA0A087WVF3 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3IA0A087WXS9 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3EA0A087X179 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D3KA0A087X1G2 549 aa8.3□□□□□ -1.08
DDB1-217ENST00000540166 LOC102723532A0A0G2JNH3 316 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms