RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ANKRD27Q96NW4 1050 aa15.23■□□□□ 0.03
TRAF3-204ENST00000539721 RBCK1Q9BYM8 510 aa15.23■□□□□ 0.03
TRAF3-204ENST00000539721 APMAPQ9HDC9 416 aa15.23■□□□□ 0.03
TRAF3-204ENST00000539721 ACSS1Q9NUB1 689 aaPredicted RBP15.23■□□□□ 0.03
TRAF3-204ENST00000539721 TAS2R9Q9NYW1 312 aa15.23■□□□□ 0.03
TRAF3-204ENST00000539721 MRPS33Q9Y291 106 aaKnown RBP15.23■□□□□ 0.03
TRAF3-204ENST00000539721 NEUROG3Q9Y4Z2 214 aa15.23■□□□□ 0.03
TRAF3-204ENST00000539721 TMX2-CTNND1H3BSU7 103 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 NME4O00746 187 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 TIAF1O95411 115 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 SLC34A2O95436 690 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 C8orf89P0DMQ9 161 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 FGF5P12034 268 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 HOXB9P17482 250 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 CSNK2A2P19784 350 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 FBLP22087 321 aaKnown RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 FEN1P39748 380 aaKnown RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 NCBP2P52298 156 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 LIMK1P53667 647 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 IL11RAQ14626 422 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 RUNDC3AQ59EK9 446 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 RABL3Q5HYI8 236 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 CDCP2Q5VXM1 449 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 RHBDD2Q6NTF9 364 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 PWWP2BQ6NUJ5 590 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 SLC15A3Q8IY34 581 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 FBXW8Q8N3Y1 598 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 RNF148Q8N7C7 305 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 BMPERQ8N8U9 685 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 OR4K14Q8NGD5 310 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 OR8J3Q8NGG0 315 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 OR51Q1Q8NH59 317 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 GOT1L1Q8NHS2 421 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 ZFP28Q8NHY6 868 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 TANKQ92844 425 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 COL26A1Q96A83 441 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 CNRIP1Q96F85 164 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 CMKLR1Q99788 373 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 CTRCQ99895 268 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 YIPF2Q9BWQ6 316 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 ZNF304Q9HCX3 659 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 CMTM6Q9NX76 183 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 ABCD2Q9UBJ2 740 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 ZNF282Q9UDV7 671 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 ERVK-11Q9UQG0 969 aa15.22■□□□□ 0.03
TRAF3-204ENST00000539721 NUP214P35658 2090 aaPredicted RBP15.22■□□□□ 0.03
TRAF3-204ENST00000539721 MYO1GB0I1T2 1018 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 POLR1CO15160 346 aaPredicted RBP15.21■□□□□ 0.03
TRAF3-204ENST00000539721 ZCCHC18P0CG32 403 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 CCL4P13236 92 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 SOAT1P35610 550 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 CLDN6P56747 220 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 MTPNP58546 118 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 MC2RQ01718 297 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 HSPB3Q12988 150 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 CEACAM7Q14002 265 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 SELPLGQ14242 412 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 ZNF750Q32MQ0 723 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 PIGGQ5H8A4 983 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 SAMD4BQ5PRF9 694 aaKnown RBP15.21■□□□□ 0.03
TRAF3-204ENST00000539721 ARHGAP40Q5TG30 622 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 PGM2L1Q6PCE3 622 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 DHRS13Q6UX07 377 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 ZNF551Q7Z340 670 aaPredicted RBP15.21■□□□□ 0.03
TRAF3-204ENST00000539721 OR4N5Q8IXE1 308 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 SAMD14Q8IZD0 417 aaPredicted RBP15.21■□□□□ 0.03
TRAF3-204ENST00000539721 CLIP3Q96DZ5 547 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 AURKBQ96GD4 344 aaPredicted RBP15.21■□□□□ 0.03
TRAF3-204ENST00000539721 AMDHD1Q96NU7 426 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 SH3GL1Q99961 368 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 GLIPR2Q9H4G4 154 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 PCDHB3Q9Y5E6 796 aa15.21■□□□□ 0.03
TRAF3-204ENST00000539721 EP300Q09472 2414 aaPredicted RBP15.21■□□□□ 0.03
TRAF3-204ENST00000539721 A0A1W2PS29 197 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 BLACEA4D250 179 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 LDB3O75112 727 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 MT-CO3P00414 261 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 HBQ1P09105 142 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 XCR1P46094 333 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 XKP51811 444 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 FOLH1Q04609 750 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 DUSP2Q05923 314 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 DSG2Q14126 1118 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 MLC1Q15049 377 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 ISXQ2M1V0 245 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 HPS6Q86YV9 775 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 CCDC116Q8IYX3 515 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 TRIML2Q8N7C3 387 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 TBC1D20Q96BZ9 403 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 ZNF681Q96N22 645 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 CPPED1Q9BRF8 314 aaPredicted RBP15.21■□□□□ 0.02
TRAF3-204ENST00000539721 THUMPD3Q9BV44 507 aaKnown RBP15.21■□□□□ 0.02
TRAF3-204ENST00000539721 NEUROD4Q9HD90 331 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 FBXO8Q9NRD0 319 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 LOXL2Q9Y4K0 774 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 MAP4K5Q9Y4K4 846 aa15.21■□□□□ 0.02
TRAF3-204ENST00000539721 B4E171 279 aa15.2■□□□□ 0.02
TRAF3-204ENST00000539721 H0YHG0 523 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms