RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SSPNQ14714 243 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 KRT72Q14CN4 511 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 PCOLCEQ15113 449 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 NR6A1Q15406 480 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ZNF750Q32MQ0 723 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 LACTB2Q53H82 288 aaPredicted RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 NDUFAF5Q5TEU4 345 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ACSM2BQ68CK6 577 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 FAM71E1Q6IPT2 247 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 FAM180BQ6P0A1 224 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 CCDC81Q6ZN84 652 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 QSOX2Q6ZRP7 698 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 SPATA19Q7Z5L4 167 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ANKRD37Q7Z713 158 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 MRGPREQ86SM8 312 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 OR4N5Q8IXE1 308 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 CPSF7Q8N684 471 aaKnown RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 OR11G2Q8NGC1 345 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 KIAA1143Q96AT1 154 aaPredicted RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ERP27Q96DN0 273 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 CENPKQ9BS16 269 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 C1orf50Q9BV19 199 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 NMUR2Q9GZQ4 415 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 PRORYQ9H606 182 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 WDR70Q9NW82 654 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 NMRK1Q9NWW6 199 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 LYARQ9NX58 379 aaKnown RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 NXT1Q9UKK6 140 aaKnown RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 PCDHA9Q9Y5H5 950 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 CROCCQ5TZA2 2017 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 A0A088AWK7 358 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 CDC14CA4D256 554 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 E9PBE3 544 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 ANKRD28O15084 1053 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 UBDO15205 165 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 SLC22A2O15244 555 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 KLHL41O60662 606 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 SEC22BO75396 215 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 CELA2AP08217 269 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 ANXA4P09525 319 aaPredicted RBP12.18□□□□□ -0.46
CCDC42-202ENST00000539522 BCKDHAP12694 445 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 CD1EP15812 388 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 ZNF10P21506 573 aaPredicted RBP12.18□□□□□ -0.46
CCDC42-202ENST00000539522 IL10P22301 178 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 CPN2P22792 545 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 OTX2P32243 289 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 MAPK12P53778 367 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 DIO3P55073 304 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 TAS2R50P59544 299 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 BNIP1Q12981 228 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 ST3GAL2Q16842 350 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 IMPG1Q17R60 797 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 MPEG1Q2M385 716 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 SMU1Q2TAY7 513 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 MINDY4Q4G0A6 757 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 CPZQ66K79 652 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 CYP20A1Q6UW02 462 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 ZNF595Q8IYB9 648 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 EFCAB3Q8N7B9 438 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 TUBGCP3Q96CW5 907 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 NSL1Q96IY1 281 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 METTL2AQ96IZ6 378 aaKnown RBP12.18□□□□□ -0.46
CCDC42-202ENST00000539522 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 CCDC106Q9BWC9 280 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 PRDM9Q9NQV7 894 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 SEMA3GQ9NS98 782 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 AHSPQ9NZD4 102 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 PADI2Q9Y2J8 665 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 BOD1L1Q8NFC6 3051 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 DOCK10Q96BY6 2186 aa12.18□□□□□ -0.46
CCDC42-202ENST00000539522 EPG5Q9HCE0 2579 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 IGHV1-45A0A0A0MS14 117 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 ZNF891A8MT65 544 aaPredicted RBP12.17□□□□□ -0.46
CCDC42-202ENST00000539522 CAPN14A8MX76 684 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 PRMT3O60678 531 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 CTNSO60931 367 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 UBOX5O94941 541 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 HEXBP07686 556 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 NR2F6P10588 404 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 PCSK2P16519 638 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 PTGER1P34995 402 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 HSD17B7P56937 341 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 TRA2BP62995 288 aaKnown RBP12.17□□□□□ -0.46
CCDC42-202ENST00000539522 SKP1P63208 163 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 FOLH1Q04609 750 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 EEF1A2Q05639 463 aaKnown RBP12.17□□□□□ -0.46
CCDC42-202ENST00000539522 VAC14Q08AM6 782 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 PTGR1Q14914 329 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 ZNF385BQ569K4 471 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 TMEM198Q66K66 360 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 OGFOD2Q6N063 350 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 SLC48A1Q6P1K1 146 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 C19orf48Q6RUI8 117 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 PAGE2Q7Z2X7 111 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 PARP9Q8IXQ6 854 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 NFAM1Q8NET5 270 aaPredicted RBP12.17□□□□□ -0.46
CCDC42-202ENST00000539522 CLHC1Q8NHS4 586 aa12.17□□□□□ -0.46
CCDC42-202ENST00000539522 CNRIP1Q96F85 164 aaPredicted RBP12.17□□□□□ -0.46
CCDC42-202ENST00000539522 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms