RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZNF407Q9C0G0 2248 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 CPSF6Q16630 551 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCARB1-206ENST00000539320 GPR180Q86V85 440 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 OR4N5Q8IXE1 308 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 PLD6Q8N2A8 252 aaKnown RBP20.59■□□□□ 0.89
SCARB1-206ENST00000539320 L3MBTL4Q8NA19 623 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 ZNF721Q8TF20 911 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 PHF10Q8WUB8 498 aaKnown RBP20.59■□□□□ 0.89
SCARB1-206ENST00000539320 ZNF592Q92610 1267 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 PHF12Q96QT6 1004 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 PAFAH2Q99487 392 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 ZNF717Q9BY31 904 aaPredicted RBP20.59■□□□□ 0.89
SCARB1-206ENST00000539320 RUBCNLQ9H714 662 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 CHST11Q9NPF2 352 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 DEPPQ9NTK1 212 aa20.59■□□□□ 0.89
SCARB1-206ENST00000539320 LYARQ9NX58 379 aaKnown RBP20.59■□□□□ 0.89
SCARB1-206ENST00000539320 DNAJC13O75165 2243 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 E9PLN8 166 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 DYRK3O43781 588 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 CDC40O60508 579 aaKnown RBP eCLIP20.58■□□□□ 0.892e-6■□□□□ 8.5
SCARB1-206ENST00000539320 PRF1P14222 555 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 PTX3P26022 381 aaPredicted RBP20.58■□□□□ 0.89
SCARB1-206ENST00000539320 TLX1P31314 330 aaPredicted RBP20.58■□□□□ 0.89
SCARB1-206ENST00000539320 PTGS2P35354 604 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 BUD31P41223 144 aaPredicted RBP20.58■□□□□ 0.89
SCARB1-206ENST00000539320 SERPINB9P50453 376 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 FOLH1Q04609 750 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 C18orf63Q68DL7 685 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 RTL4Q6ZR62 310 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 NCCRP1Q6ZVX7 275 aaPredicted RBP20.58■□□□□ 0.89
SCARB1-206ENST00000539320 DOLPP1Q86YN1 238 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 MNS1Q8NEH6 495 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 IFT81Q8WYA0 676 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 TANKQ92844 425 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 ART5Q96L15 291 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 VKORC1Q9BQB6 163 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 ZNF358Q9NW07 568 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 XPR1Q9UBH6 696 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 TMCO1Q9UM00 188 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 RNF11Q9Y3C5 154 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 ATG4BQ9Y4P1 393 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 IKBKGQ9Y6K9 419 aa20.58■□□□□ 0.89
SCARB1-206ENST00000539320 A0A0A6YYD5 115 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 A0A0G2JMM0 328 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 A0A1B0GTH9 108 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 A0A1W2PPB8 328 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 A0A1W2PRS3 328 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 PINLYPA6NC86 204 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 KIR3DP1A8MWS1 328 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 ACOT7O00154 380 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 EEDO75530 441 aaKnown RBP20.57■□□□□ 0.88
SCARB1-206ENST00000539320 PRKRAO75569 313 aaKnown RBP20.57■□□□□ 0.88
SCARB1-206ENST00000539320 RBP1P09455 135 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 NR2F6P10588 404 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 ALOX15P16050 662 aaPredicted RBP20.57■□□□□ 0.88
SCARB1-206ENST00000539320 BSGP35613 385 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 ARL1P40616 181 aaPredicted RBP20.57■□□□□ 0.88
SCARB1-206ENST00000539320 PLGLB1Q02325 96 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 BIKQ13323 160 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 CUL3Q13618 768 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 TSNAXIP1Q2TAA8 658 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 MRM1Q6IN84 353 aaKnown RBP20.57■□□□□ 0.88
SCARB1-206ENST00000539320 CD163Q86VB7 1156 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 NUDT13Q86X67 352 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 MCEMP1Q8IX19 187 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 OR2M7Q8NG81 312 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 NUBPLQ8TB37 319 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 FAM57AQ8TBR7 257 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 WDR20Q8TBZ3 569 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 SCYL1Q96KG9 808 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 DMRTA2Q96SC8 542 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 PELOQ9BRX2 385 aaKnown RBP20.57■□□□□ 0.88
SCARB1-206ENST00000539320 NOL11Q9H8H0 719 aaKnown RBP20.57■□□□□ 0.88
SCARB1-206ENST00000539320 PLSCR2Q9NRY7 297 aa20.57■□□□□ 0.88
SCARB1-206ENST00000539320 STX16-NPEPL1H3BU86 382 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 STX16O14662 325 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 TMPRSS11DO60235 418 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 KRT38O76015 456 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 CLDN9O95484 217 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 IGKV3-11P04433 115 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 TPOP07202 933 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 CTAGE8P0CG41 777 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 ECHS1P30084 290 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 CCNG1P51959 295 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 OPN5Q6U736 354 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 CYP20A1Q6UW02 462 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 C3P1Q6ZMU1 363 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 GK5Q6ZS86 529 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 CTAGE4Q8IX94 777 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 GOLM1Q8NBJ4 401 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 OR52N2Q8NGI0 321 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 ATP6V1E2Q96A05 226 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 PHF21BQ96EK2 531 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 SENP5Q96HI0 755 aaPredicted RBP20.56■□□□□ 0.88
SCARB1-206ENST00000539320 FBXL20Q96IG2 436 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 SGCZQ96LD1 299 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 DDX31Q9H8H2 851 aaKnown RBP20.56■□□□□ 0.88
SCARB1-206ENST00000539320 PSD3Q9NYI0 1048 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 PPT2Q9UMR5 302 aa20.56■□□□□ 0.88
SCARB1-206ENST00000539320 FAM166BA8MTA8 275 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms