RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PHF11Q9UIL8 331 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 PCDHA9Q9Y5H5 950 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 A0A088AWK7 358 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 SAGE2PA6NJ88 616 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 KLF11O14901 512 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 CTNSO60931 367 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 C1QL1O75973 258 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 DDAH2O95865 285 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 IGHEP01854 428 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 CYC1P08574 325 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 CD63P08962 238 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 ZNF10P21506 573 aaPredicted RBP12.23□□□□□ -0.45
CHFR-216ENST00000538235 SOX11P35716 441 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 CCL11P51671 97 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 OR4D2P58180 307 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 TAS2R50P59544 299 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 RHDQ02161 417 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 ACSM2AQ08AH3 577 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 SLC13A2Q13183 592 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 LTB4RQ15722 352 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 GALNTL6Q49A17 601 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 SOWAHCQ53LP3 525 aaPredicted RBP12.23□□□□□ -0.45
CHFR-216ENST00000538235 SPIN4Q56A73 249 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 SPDYAQ5MJ70 313 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 C6orf136Q5SQH8 315 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 ACSM2BQ68CK6 577 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 FCRLBQ6BAA4 426 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 FAM71E1Q6IPT2 247 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 ANKRD26P1Q6NSI1 321 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 NOXRED1Q6NXP6 359 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 SLC48A1Q6P1K1 146 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 CYP20A1Q6UW02 462 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 NDUFAF7Q7L592 441 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 APCDD1LQ8NCL9 501 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 ADAMTS18Q8TE60 1221 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 APOBEC4Q8WW27 367 aaKnown RBP12.23□□□□□ -0.45
CHFR-216ENST00000538235 PPWD1Q96BP3 646 aaKnown RBP12.23□□□□□ -0.45
CHFR-216ENST00000538235 C19orf60Q96EN9 201 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 CNRIP1Q96F85 164 aaPredicted RBP12.23□□□□□ -0.45
CHFR-216ENST00000538235 ABHD17AQ96GS6 310 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 ZNF681Q96N22 645 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 CATSPER2Q96P56 530 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 NUF2Q9BZD4 464 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 ZNF552Q9H707 407 aaPredicted RBP12.23□□□□□ -0.45
CHFR-216ENST00000538235 EML4Q9HC35 981 aaKnown RBP12.23□□□□□ -0.45
CHFR-216ENST00000538235 SLAMF7Q9NQ25 335 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 C1orf109Q9NX04 203 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 BAIAP2L1Q9UHR4 511 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 TP53TG5Q9Y2B4 290 aa12.23□□□□□ -0.45
CHFR-216ENST00000538235 COL6A6A6NMZ7 2263 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 NSG1A0A0A6YYJ2 146 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 TMEM200CA6NKL6 621 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 SLC28A1O00337 649 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 ZNF354AO60765 605 aaPredicted RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 PEX11AO75192 247 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 NME6O75414 186 aaPredicted RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 MYO1DO94832 1006 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 ANXA4P09525 319 aaPredicted RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 ALDOCP09972 364 aaKnown RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 KITP10721 976 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 RPL14P50914 215 aaKnown RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 SOX8P57073 446 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 MGAT2Q10469 447 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 KCNAB2Q13303 367 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 PTGR1Q14914 329 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 IMPG1Q17R60 797 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 SLC9B1Q4ZJI4 515 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 C16orf47Q6ZP98 133 aaPredicted RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 FAM47EQ6ZV65 393 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 WDR75Q8IWA0 830 aaKnown RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 GALNT16Q8N428 558 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 TMEM102Q8N9M5 508 aaPredicted RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 CDC26Q8NHZ8 85 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 SUN3Q8TAQ9 357 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 RAB3IL1Q8TBN0 382 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 BRIX1Q8TDN6 353 aaKnown RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 CKAP2Q8WWK9 683 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 TSSK3Q96PN8 268 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 CENPKQ9BS16 269 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 ALOXE3Q9BYJ1 711 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 MYNNQ9NPC7 610 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 PNO1Q9NRX1 252 aaKnown RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 THAP1Q9NVV9 213 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.22□□□□□ -0.45
CHFR-216ENST00000538235 CNTRLQ7Z7A1 2325 aa12.22□□□□□ -0.45
CHFR-216ENST00000538235 NCKAP5O14513 1909 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 PEX12O00623 359 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 ATXN7O15265 892 aaPredicted RBP12.21□□□□□ -0.45
CHFR-216ENST00000538235 SEC22BO75396 215 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 NEFHP12036 1026 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 BCKDHAP12694 445 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 DIO3P55073 304 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 ZNF763Q0D2J5 394 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 PLAG1Q6DJT9 500 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 CGB2Q6NT52 195 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 PAGE2Q7Z2X7 111 aa12.21□□□□□ -0.45
CHFR-216ENST00000538235 SIRT6Q8N6T7 355 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms