RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CERS2Q96G23 380 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 QRFPRQ96P65 431 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 DGAT2Q96PD7 388 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 TRIB1Q96RU8 372 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 DOHHQ9BU89 302 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 EPB41L4BQ9H329 900 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 ZNF629Q9UEG4 869 aaPredicted RBP7.4□□□□□ -1.22
CHFR-211ENST00000535897 CAMK2AQ9UQM7 478 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 VWA7Q9Y334 891 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 PCDHGB3Q9Y5G1 929 aa7.4□□□□□ -1.22
CHFR-211ENST00000535897 ATRQ13535 2644 aa7.4□□□□□ -1.23
CHFR-211ENST00000535897 ZANQ9Y493 2812 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 LRRC3CA6NJW4 275 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 GOLGA6L6A8MZA4 724 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 AHRRA9YTQ3 701 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 KDM4EB2RXH2 506 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 CES2O00748 559 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 SMAD7O15105 426 aaKnown RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 ARHGEF9O43307 516 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ETHE1O95571 254 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 LY6G6DO95868 133 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 EPPINO95925 133 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ZNF37AP17032 561 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 SERPINB3P29508 390 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 RPL21P46778 160 aaKnown RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 CPA2P48052 419 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 KCNC1P48547 511 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 SF3B4Q15427 424 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHFR-211ENST00000535897 PPP1R7Q15435 360 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 MPEG1Q2M385 716 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 C18orf21Q32NC0 220 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 ZNF791Q3KP31 576 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 FBXL19-AS1Q494R0 122 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 PIGGQ5H8A4 983 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 Q5PR19 223 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 HP1BP3Q5SSJ5 553 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 SHEQ5VZ18 495 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ADNP2Q6IQ32 1131 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ABHD17CQ6PCB6 329 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 SLC29A4Q7RTT9 530 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 CNTN4Q8IWV2 1026 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 OR4N5Q8IXE1 308 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 C9orf40Q8IXQ3 194 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 LRRC25Q8N386 305 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 NAT8LQ8N9F0 302 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 SNX31Q8N9S9 440 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 TRIM58Q8NG06 486 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 OR10G3Q8NGC4 313 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 PAQR8Q8TEZ7 354 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ZNF721Q8TF20 911 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 DIO2Q92813 273 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 PPWD1Q96BP3 646 aaKnown RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 CFAP36Q96G28 342 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 RBM18Q96H35 190 aaKnown RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 PDLIM5Q96HC4 596 aaKnown RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 ART5Q96L15 291 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ZNF597Q96LX8 424 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 KCNC2Q96PR1 638 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 F2RL3Q96RI0 385 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 KRT12Q99456 494 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 MAPKAP1Q9BPZ7 522 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ROGDIQ9GZN7 287 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 PLEKHF2Q9H8W4 249 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 ACKR4Q9NPB9 350 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHFR-211ENST00000535897 BEX4Q9NWD9 120 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 QPCTLQ9NXS2 382 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 CNIH4Q9P003 139 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 CTNNAL1Q9UBT7 734 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 CORO1CQ9ULV4 474 aaPredicted RBP7.39□□□□□ -1.23
CHFR-211ENST00000535897 OARD1Q9Y530 152 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 CSPG4Q6UVK1 2322 aa7.39□□□□□ -1.23
CHFR-211ENST00000535897 MXRA5Q9NR99 2828 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 IQANK1A0A1B0GTG1 560 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 KIAA1324LA8MWY0 1029 aaPredicted RBP7.38□□□□□ -1.23
CHFR-211ENST00000535897 RTCAO00442 366 aaKnown RBP7.38□□□□□ -1.23
CHFR-211ENST00000535897 CASKO14936 926 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 SMPD2O60906 423 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 SH3BGRLO75368 114 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 ERN1O75460 977 aaKnown RBP7.38□□□□□ -1.23
CHFR-211ENST00000535897 FREM3P0C091 2139 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 CD53P19397 219 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 CPN2P22792 545 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 CEACAM8P31997 349 aaPredicted RBP7.38□□□□□ -1.23
CHFR-211ENST00000535897 OPRM1P35372 400 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 TIMP3P35625 211 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 SSR2P43308 183 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 STT3AP46977 705 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 SLC6A12P48065 614 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 MASP1P48740 699 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 ZNF136P52737 540 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 PPP2R2BQ00005 443 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 SORDQ00796 357 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 PLIN5Q00G26 463 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 CRYZQ08257 329 aaKnown RBP7.38□□□□□ -1.23
CHFR-211ENST00000535897 ZNF460Q14592 562 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 TSNQ15631 228 aaKnown RBP7.38□□□□□ -1.23
CHFR-211ENST00000535897 AP5B1Q2VPB7 878 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 ADPRMQ3LIE5 342 aa7.38□□□□□ -1.23
CHFR-211ENST00000535897 PAGE2BQ5JRK9 111 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms