RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TWIST1	Q15672	202 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	UBE2S	Q16763	222 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	VWC2	Q2TAL6	325 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	KLHL26	Q53HC5	615 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	XKR3	Q5GH77	459 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LCE5A	Q5TCM9	118 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SDHAF4	Q5VUM1	108 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CAVIN1	Q6NZI2	390 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PRSS57	Q6UWY2	283 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442		Q6ZS92	163 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ERN2	Q76MJ5	926 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GPR180	Q86V85	440 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CPSF7	Q8N684	471 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC5A8	Q8N695	610 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RNF149	Q8NC42	400 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CAMKV	Q8NCB2	501 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR14A16	Q8NHC5	309 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SPATA22	Q8NHS9	363 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LMX1A	Q8TE12	382 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZFAND2B	Q8WV99	257 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PIBF1	Q8WXW3	757 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	AZIN2	Q96A70	460 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RTP4	Q96DX8	246 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	JAKMIP1	Q96N16	626 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MS4A10	Q96PG2	267 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	XPO6	Q96QU8	1125 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR6C1	Q96RD1	312 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CTRC	Q99895	268 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NEUROG2	Q9H2A3	272 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	EQTN	Q9NQ60	294 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MBNL1	Q9NR56	388 aa	Known RBP	4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	KLHL9	Q9P2J3	617 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LIPG	Q9Y5X9	500 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CPQ	Q9Y646	472 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HCFC1	P51610	2035 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HECTD4	Q9Y4D8	3996 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ANAPC1	Q9H1A4	1944 aa		4.15	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PIKFYVE	Q9Y2I7	2098 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IGLV5-52	A0A0A0MRZ9	124 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	KRTAP4-8	A0A0G2JLE6	195 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR2M5	A3KFT3	312 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TRIM77	I1YAP6	450 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC16A5	O15375	505 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IPO8	O15397	1037 aa	Known RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC7A4	O43246	635 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SSX4	O60224	188 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	WISP2	O76076	250 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE7	O76087	117 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PENK	P01210	267 aa	Predicted RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR52Z1	P0C646	297 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CISD3	P0C7P0	127 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	DANCR	P0C864	163 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE12F	P0CL80	117 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE12G	P0CL81	117 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE12I	P0CL82	117 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	S1PR1	P21453	382 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FBL	P22087	321 aa	Known RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CASP14	P31944	242 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CTNNA1	P35221	906 aa	Known RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TNNT3	P45378	269 aa	Predicted RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HAND2	P61296	217 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SNRPE	P62304	92 aa	Known RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CDK3	Q00526	305 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE1	Q13065	139 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GAGE4	Q13068	117 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NFATC2	Q13469	925 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	UGCG	Q16739	394 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC39A12	Q504Y0	691 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LCE1D	Q5T752	114 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SHQ1	Q6PI26	577 aa	Known RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FAM198B	Q6UWH4	519 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC47A2	Q86VL8	602 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GLCCI1	Q86VQ1	547 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	METTL23	Q86XA0	190 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SFR1	Q86XK3	245 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PLA2G4D	Q86XP0	818 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC22A18AS	Q8N1D0	253 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR2AJ1	Q8NGZ0	328 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	THAP6	Q8TBB0	222 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MAGEC3	Q8TD91	643 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SORCS1	Q8WY21	1168 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	VMP1	Q96GC9	406 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SCMH1	Q96GD3	660 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF577	Q9BSK1	485 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TEKT3	Q9BXF9	490 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLA2	Q9H6Q3	261 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RDH14	Q9HBH5	336 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RHCG	Q9UBD6	479 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	UXT	Q9UBK9	157 aa	Predicted RBP	4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LRWD1	Q9UFC0	647 aa		4.14	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TRPM6	Q9BX84	2022 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LCE6A	A0A183	80 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NKX2-6	A6NCS4	301 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442		H3BNX3	289 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MID1	O15344	667 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SMPD2	O60906	423 aa		4.13	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TGDS	O95455	350 aa		4.13	□□□□□ -1.75

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